Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ARFGEF3Q5TH69 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ARFGEF3Q5TH69 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ARFGEF3Q5TH69 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ARFGEF3Q5TH69 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
ARFGEF3Q5TH69 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.08■□□□□ 0.16
ARFGEF3Q5TH69 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ARFGEF3Q5TH69 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
ARFGEF3Q5TH69 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 HBZP1-201ENST00000354915 429 ntBASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 AC112907.2-201ENST00000448639 330 ntBASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 HYMAI.1-201ENST00000620949 238 ntBASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 AP000523.1-201ENST00000398242 1049 ntBASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
ARFGEF3Q5TH69 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 AC092647.4-201ENST00000457211 535 ntBASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 AL121956.5-201ENST00000625261 221 ntBASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ARFGEF3Q5TH69 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC16.05■□□□□ 0.16
ARFGEF3Q5TH69 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.05■□□□□ 0.16
ARFGEF3Q5TH69 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARFGEF3Q5TH69 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARFGEF3Q5TH69 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.05■□□□□ 0.16
ARFGEF3Q5TH69 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.05■□□□□ 0.16
ARFGEF3Q5TH69 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.05■□□□□ 0.16
ARFGEF3Q5TH69 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARFGEF3Q5TH69 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.05■□□□□ 0.16
ARFGEF3Q5TH69 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.05■□□□□ 0.16
ARFGEF3Q5TH69 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ARFGEF3Q5TH69 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.05■□□□□ 0.16
ARFGEF3Q5TH69 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.05■□□□□ 0.16
ARFGEF3Q5TH69 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.05■□□□□ 0.16
ARFGEF3Q5TH69 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.05■□□□□ 0.16
ARFGEF3Q5TH69 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms