Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
RC3H1Q5TC82 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RC3H1Q5TC82 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RC3H1Q5TC82 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
RC3H1Q5TC82 MIR564-202ENST00000385049 94 ntBASIC23.85■■□□□ 1.41
RC3H1Q5TC82 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC23.85■■□□□ 1.41
RC3H1Q5TC82 ABR-204ENST00000543210 1049 ntTSL 2 BASIC23.85■■□□□ 1.41
RC3H1Q5TC82 Z69720.1-201ENST00000601483 472 ntBASIC23.85■■□□□ 1.41
RC3H1Q5TC82 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC23.85■■□□□ 1.41
RC3H1Q5TC82 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.85■■□□□ 1.41
RC3H1Q5TC82 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RC3H1Q5TC82 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RC3H1Q5TC82 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
RC3H1Q5TC82 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RC3H1Q5TC82 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RC3H1Q5TC82 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RC3H1Q5TC82 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RC3H1Q5TC82 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RC3H1Q5TC82 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC23.84■■□□□ 1.41
RC3H1Q5TC82 RN7SL606P-201ENST00000472779 293 ntBASIC23.84■■□□□ 1.41
RC3H1Q5TC82 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RC3H1Q5TC82 GPR32P1-201ENST00000601788 811 ntBASIC23.84■■□□□ 1.41
RC3H1Q5TC82 AC138894.3-201ENST00000603787 634 ntBASIC23.84■■□□□ 1.41
RC3H1Q5TC82 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RC3H1Q5TC82 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RC3H1Q5TC82 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC23.84■■□□□ 1.41
RC3H1Q5TC82 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RC3H1Q5TC82 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RC3H1Q5TC82 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RC3H1Q5TC82 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
RC3H1Q5TC82 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC23.83■■□□□ 1.41
RC3H1Q5TC82 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
RC3H1Q5TC82 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
RC3H1Q5TC82 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
RC3H1Q5TC82 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC23.83■■□□□ 1.41
RC3H1Q5TC82 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RC3H1Q5TC82 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RC3H1Q5TC82 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RC3H1Q5TC82 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RC3H1Q5TC82 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC23.83■■□□□ 1.41
RC3H1Q5TC82 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
RC3H1Q5TC82 FICD-205ENST00000552758 603 ntTSL 2 BASIC23.83■■□□□ 1.41
RC3H1Q5TC82 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
RC3H1Q5TC82 AC099336.1-202ENST00000602961 463 ntBASIC23.83■■□□□ 1.41
RC3H1Q5TC82 BX640515.1-201ENST00000617215 977 ntBASIC23.83■■□□□ 1.41
RC3H1Q5TC82 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RC3H1Q5TC82 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
RC3H1Q5TC82 LINC00167-201ENST00000530583 1419 ntBASIC23.83■■□□□ 1.4
RC3H1Q5TC82 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
RC3H1Q5TC82 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC23.82■■□□□ 1.4
RC3H1Q5TC82 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RC3H1Q5TC82 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RC3H1Q5TC82 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RC3H1Q5TC82 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
RC3H1Q5TC82 MED17-221ENST00000639724 2317 ntTSL 5 BASIC23.82■■□□□ 1.4
RC3H1Q5TC82 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
RC3H1Q5TC82 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
RC3H1Q5TC82 AKR1C7P-201ENST00000305623 895 ntBASIC23.82■■□□□ 1.4
RC3H1Q5TC82 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RC3H1Q5TC82 ENSA-205ENST00000361532 792 ntTSL 2 BASIC23.82■■□□□ 1.4
RC3H1Q5TC82 TEX30-205ENST00000376029 959 ntTSL 2 BASIC23.82■■□□□ 1.4
RC3H1Q5TC82 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RC3H1Q5TC82 IGHGP-201ENST00000390555 1178 ntBASIC23.82■■□□□ 1.4
RC3H1Q5TC82 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
RC3H1Q5TC82 BET1L-206ENST00000486280 665 ntTSL 3 BASIC23.82■■□□□ 1.4
RC3H1Q5TC82 AL671883.3-201ENST00000603274 991 ntBASIC23.82■■□□□ 1.4
RC3H1Q5TC82 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RC3H1Q5TC82 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RC3H1Q5TC82 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC23.82■■□□□ 1.4
RC3H1Q5TC82 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
RC3H1Q5TC82 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC23.82■■□□□ 1.4
RC3H1Q5TC82 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RC3H1Q5TC82 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC23.82■■□□□ 1.4
RC3H1Q5TC82 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC23.82■■□□□ 1.4
RC3H1Q5TC82 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC23.82■■□□□ 1.4
RC3H1Q5TC82 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RC3H1Q5TC82 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RC3H1Q5TC82 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RC3H1Q5TC82 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RC3H1Q5TC82 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RC3H1Q5TC82 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RC3H1Q5TC82 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC23.81■■□□□ 1.4
RC3H1Q5TC82 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
RC3H1Q5TC82 ELP6-205ENST00000439305 880 ntTSL 2 BASIC23.81■■□□□ 1.4
RC3H1Q5TC82 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
RC3H1Q5TC82 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC23.81■■□□□ 1.4
RC3H1Q5TC82 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC23.81■■□□□ 1.4
RC3H1Q5TC82 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC23.81■■□□□ 1.4
RC3H1Q5TC82 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RC3H1Q5TC82 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RC3H1Q5TC82 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
RC3H1Q5TC82 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RC3H1Q5TC82 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RC3H1Q5TC82 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RC3H1Q5TC82 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RC3H1Q5TC82 PPIE-208ENST00000470213 927 ntTSL 3 BASIC23.8■■□□□ 1.4
RC3H1Q5TC82 AC079776.4-201ENST00000511039 504 ntBASIC23.8■■□□□ 1.4
RC3H1Q5TC82 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC23.8■■□□□ 1.4
RC3H1Q5TC82 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC23.8■■□□□ 1.4
RC3H1Q5TC82 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms