Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC22.9■■□□□ 1.26
RFX7Q2KHR2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC22.9■■□□□ 1.26
RFX7Q2KHR2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RFX7Q2KHR2 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
RFX7Q2KHR2 AL031133.1-201ENST00000406807 723 ntBASIC22.89■■□□□ 1.26
RFX7Q2KHR2 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.26
RFX7Q2KHR2 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC22.89■■□□□ 1.26
RFX7Q2KHR2 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
RFX7Q2KHR2 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC22.89■■□□□ 1.26
RFX7Q2KHR2 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC22.89■■□□□ 1.26
RFX7Q2KHR2 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC22.89■■□□□ 1.26
RFX7Q2KHR2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
RFX7Q2KHR2 KATNBL1P6-202ENST00000562413 1466 ntBASIC22.89■■□□□ 1.26
RFX7Q2KHR2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC22.89■■□□□ 1.26
RFX7Q2KHR2 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RFX7Q2KHR2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
RFX7Q2KHR2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RFX7Q2KHR2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RFX7Q2KHR2 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC22.89■■□□□ 1.25
RFX7Q2KHR2 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
RFX7Q2KHR2 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
RFX7Q2KHR2 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
RFX7Q2KHR2 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
RFX7Q2KHR2 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
RFX7Q2KHR2 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
RFX7Q2KHR2 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC22.89■■□□□ 1.25
RFX7Q2KHR2 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC22.89■■□□□ 1.25
RFX7Q2KHR2 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC22.89■■□□□ 1.25
RFX7Q2KHR2 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC22.89■■□□□ 1.25
RFX7Q2KHR2 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC22.89■■□□□ 1.25
RFX7Q2KHR2 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC22.89■■□□□ 1.25
RFX7Q2KHR2 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC22.89■■□□□ 1.25
RFX7Q2KHR2 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
RFX7Q2KHR2 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RFX7Q2KHR2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RFX7Q2KHR2 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RFX7Q2KHR2 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC22.88■■□□□ 1.25
RFX7Q2KHR2 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RFX7Q2KHR2 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC22.88■■□□□ 1.25
RFX7Q2KHR2 AC006333.2-201ENST00000607957 2099 ntBASIC22.88■■□□□ 1.25
RFX7Q2KHR2 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC22.88■■□□□ 1.25
RFX7Q2KHR2 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC22.88■■□□□ 1.25
RFX7Q2KHR2 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RFX7Q2KHR2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RFX7Q2KHR2 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RFX7Q2KHR2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
RFX7Q2KHR2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC22.88■■□□□ 1.25
RFX7Q2KHR2 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RFX7Q2KHR2 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RFX7Q2KHR2 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RFX7Q2KHR2 ANKRD20A18P-201ENST00000359341 492 ntBASIC22.88■■□□□ 1.25
RFX7Q2KHR2 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC22.88■■□□□ 1.25
RFX7Q2KHR2 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC22.88■■□□□ 1.25
RFX7Q2KHR2 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC22.88■■□□□ 1.25
RFX7Q2KHR2 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC22.88■■□□□ 1.25
RFX7Q2KHR2 MIR4674-201ENST00000582457 87 ntBASIC22.88■■□□□ 1.25
RFX7Q2KHR2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC22.88■■□□□ 1.25
RFX7Q2KHR2 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC22.88■■□□□ 1.25
RFX7Q2KHR2 AC008622.2-201ENST00000617006 1229 ntBASIC22.88■■□□□ 1.25
RFX7Q2KHR2 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
RFX7Q2KHR2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
RFX7Q2KHR2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RFX7Q2KHR2 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RFX7Q2KHR2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC22.87■■□□□ 1.25
RFX7Q2KHR2 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RFX7Q2KHR2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RFX7Q2KHR2 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RFX7Q2KHR2 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC22.87■■□□□ 1.25
RFX7Q2KHR2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RFX7Q2KHR2 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC22.87■■□□□ 1.25
RFX7Q2KHR2 COPE-203ENST00000351079 907 ntTSL 2 BASIC22.87■■□□□ 1.25
RFX7Q2KHR2 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
RFX7Q2KHR2 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
RFX7Q2KHR2 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
RFX7Q2KHR2 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
RFX7Q2KHR2 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
RFX7Q2KHR2 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RFX7Q2KHR2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RFX7Q2KHR2 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC22.86■■□□□ 1.25
RFX7Q2KHR2 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RFX7Q2KHR2 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
RFX7Q2KHR2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC22.86■■□□□ 1.25
RFX7Q2KHR2 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
RFX7Q2KHR2 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC22.86■■□□□ 1.25
RFX7Q2KHR2 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.86■■□□□ 1.25
RFX7Q2KHR2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
RFX7Q2KHR2 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RFX7Q2KHR2 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC22.86■■□□□ 1.25
RFX7Q2KHR2 KRT8P45-201ENST00000414328 1447 ntBASIC22.86■■□□□ 1.25
RFX7Q2KHR2 TSPY5P-201ENST00000426936 936 ntBASIC22.86■■□□□ 1.25
RFX7Q2KHR2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
RFX7Q2KHR2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC22.86■■□□□ 1.25
RFX7Q2KHR2 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC22.86■■□□□ 1.25
RFX7Q2KHR2 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC22.86■■□□□ 1.25
RFX7Q2KHR2 AL441883.1-201ENST00000566170 1045 ntBASIC22.86■■□□□ 1.25
RFX7Q2KHR2 LINC01238-205ENST00000567549 1107 ntBASIC22.86■■□□□ 1.25
RFX7Q2KHR2 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC22.86■■□□□ 1.25
RFX7Q2KHR2 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC22.86■■□□□ 1.25
RFX7Q2KHR2 AC011558.1-201ENST00000623459 338 ntBASIC22.86■■□□□ 1.25
RFX7Q2KHR2 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms