Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.85■□□□□ 0.77
CBX1P83916 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CBX1P83916 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CBX1P83916 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
CBX1P83916 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CBX1P83916 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC19.84■□□□□ 0.77
CBX1P83916 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CBX1P83916 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
CBX1P83916 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CBX1P83916 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.84■□□□□ 0.77
CBX1P83916 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.84■□□□□ 0.77
CBX1P83916 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.84■□□□□ 0.77
CBX1P83916 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC19.84■□□□□ 0.77
CBX1P83916 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CBX1P83916 AC103834.1-201ENST00000520383 144 ntBASIC19.84■□□□□ 0.77
CBX1P83916 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.84■□□□□ 0.77
CBX1P83916 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.84■□□□□ 0.77
CBX1P83916 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CBX1P83916 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
CBX1P83916 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC19.84■□□□□ 0.77
CBX1P83916 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.84■□□□□ 0.77
CBX1P83916 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.84■□□□□ 0.77
CBX1P83916 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CBX1P83916 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CBX1P83916 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CBX1P83916 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.84■□□□□ 0.77
CBX1P83916 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CBX1P83916 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CBX1P83916 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CBX1P83916 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CBX1P83916 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CBX1P83916 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CBX1P83916 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.83■□□□□ 0.77
CBX1P83916 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CBX1P83916 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CBX1P83916 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.83■□□□□ 0.77
CBX1P83916 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.83■□□□□ 0.76
CBX1P83916 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.83■□□□□ 0.76
CBX1P83916 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CBX1P83916 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CBX1P83916 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CBX1P83916 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
CBX1P83916 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.83■□□□□ 0.76
CBX1P83916 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.83■□□□□ 0.76
CBX1P83916 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CBX1P83916 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CBX1P83916 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CBX1P83916 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.83■□□□□ 0.76
CBX1P83916 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.83■□□□□ 0.76
CBX1P83916 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CBX1P83916 AC021242.3-201ENST00000607598 1377 ntBASIC19.83■□□□□ 0.76
CBX1P83916 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CBX1P83916 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CBX1P83916 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC19.82■□□□□ 0.76
CBX1P83916 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CBX1P83916 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CBX1P83916 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CBX1P83916 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
CBX1P83916 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CBX1P83916 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CBX1P83916 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CBX1P83916 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CBX1P83916 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CBX1P83916 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CBX1P83916 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CBX1P83916 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
CBX1P83916 AGK-211ENST00000629555 2765 ntTSL 5 BASIC19.82■□□□□ 0.76
CBX1P83916 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CBX1P83916 TSPY13P-201ENST00000338964 914 ntBASIC19.82■□□□□ 0.76
CBX1P83916 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.82■□□□□ 0.76
CBX1P83916 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CBX1P83916 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.82■□□□□ 0.76
CBX1P83916 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CBX1P83916 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.82■□□□□ 0.76
CBX1P83916 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CBX1P83916 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CBX1P83916 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CBX1P83916 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CBX1P83916 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.82■□□□□ 0.76
CBX1P83916 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CBX1P83916 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CBX1P83916 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.81■□□□□ 0.76
CBX1P83916 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CBX1P83916 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CBX1P83916 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CBX1P83916 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CBX1P83916 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.81■□□□□ 0.76
CBX1P83916 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CBX1P83916 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CBX1P83916 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CBX1P83916 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CBX1P83916 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CBX1P83916 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CBX1P83916 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CBX1P83916 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.81■□□□□ 0.76
CBX1P83916 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CBX1P83916 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CBX1P83916 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
CBX1P83916 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CBX1P83916 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms