Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC068587.9-201ENST00000641814 219 ntBASIC17.15■□□□□ 0.34
SUMO3P55854 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SUMO3P55854 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SUMO3P55854 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SUMO3P55854 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.15■□□□□ 0.34
SUMO3P55854 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SUMO3P55854 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.15■□□□□ 0.34
SUMO3P55854 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SUMO3P55854 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
SUMO3P55854 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SUMO3P55854 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.15■□□□□ 0.34
SUMO3P55854 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SUMO3P55854 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.14■□□□□ 0.34
SUMO3P55854 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SUMO3P55854 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SUMO3P55854 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.14■□□□□ 0.33
SUMO3P55854 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SUMO3P55854 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SUMO3P55854 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.14■□□□□ 0.33
SUMO3P55854 HEIH-201ENST00000623091 1652 ntBASIC17.14■□□□□ 0.33
SUMO3P55854 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
SUMO3P55854 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SUMO3P55854 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.14■□□□□ 0.33
SUMO3P55854 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.14■□□□□ 0.33
SUMO3P55854 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
SUMO3P55854 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SUMO3P55854 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SUMO3P55854 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SUMO3P55854 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.14■□□□□ 0.33
SUMO3P55854 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.14■□□□□ 0.33
SUMO3P55854 BX088651.1-201ENST00000540551 451 ntBASIC17.14■□□□□ 0.33
SUMO3P55854 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.14■□□□□ 0.33
SUMO3P55854 AL353719.1-201ENST00000566847 864 ntBASIC17.14■□□□□ 0.33
SUMO3P55854 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.14■□□□□ 0.33
SUMO3P55854 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SUMO3P55854 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SUMO3P55854 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SUMO3P55854 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SUMO3P55854 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SUMO3P55854 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.14■□□□□ 0.33
SUMO3P55854 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SUMO3P55854 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.14■□□□□ 0.33
SUMO3P55854 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.14■□□□□ 0.33
SUMO3P55854 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SUMO3P55854 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.13■□□□□ 0.33
SUMO3P55854 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SUMO3P55854 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.13■□□□□ 0.33
SUMO3P55854 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.13■□□□□ 0.33
SUMO3P55854 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SUMO3P55854 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SUMO3P55854 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SUMO3P55854 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SUMO3P55854 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
SUMO3P55854 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SUMO3P55854 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SUMO3P55854 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SUMO3P55854 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.13■□□□□ 0.33
SUMO3P55854 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SUMO3P55854 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SUMO3P55854 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.13■□□□□ 0.33
SUMO3P55854 TSPY15P-201ENST00000457163 923 ntBASIC17.13■□□□□ 0.33
SUMO3P55854 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
SUMO3P55854 AC128688.1-201ENST00000487626 519 ntBASIC17.13■□□□□ 0.33
SUMO3P55854 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.13■□□□□ 0.33
SUMO3P55854 NAPSB-206ENST00000562112 1266 ntBASIC17.13■□□□□ 0.33
SUMO3P55854 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.13■□□□□ 0.33
SUMO3P55854 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SUMO3P55854 AC010653.2-201ENST00000623505 997 ntBASIC17.13■□□□□ 0.33
SUMO3P55854 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SUMO3P55854 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SUMO3P55854 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SUMO3P55854 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.13■□□□□ 0.33
SUMO3P55854 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SUMO3P55854 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.13■□□□□ 0.33
SUMO3P55854 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SUMO3P55854 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SUMO3P55854 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.13■□□□□ 0.33
SUMO3P55854 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.13■□□□□ 0.33
SUMO3P55854 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SUMO3P55854 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
SUMO3P55854 AL109659.2-201ENST00000606809 1674 ntBASIC17.13■□□□□ 0.33
SUMO3P55854 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.13■□□□□ 0.33
SUMO3P55854 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SUMO3P55854 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
SUMO3P55854 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SUMO3P55854 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.12■□□□□ 0.33
SUMO3P55854 RCC2P3-201ENST00000418112 1537 ntBASIC17.12■□□□□ 0.33
SUMO3P55854 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SUMO3P55854 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.12■□□□□ 0.33
SUMO3P55854 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.12■□□□□ 0.33
SUMO3P55854 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SUMO3P55854 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SUMO3P55854 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.12■□□□□ 0.33
SUMO3P55854 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SUMO3P55854 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.12■□□□□ 0.33
SUMO3P55854 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SUMO3P55854 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SUMO3P55854 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SUMO3P55854 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SUMO3P55854 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms