Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 AC239809.2-201ENST00000415381 517 ntBASIC16.83■□□□□ 0.28
SLC25A1P53007 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC25A1P53007 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC25A1P53007 RNA5SP413-201ENST00000516373 109 ntBASIC16.83■□□□□ 0.28
SLC25A1P53007 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC25A1P53007 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC25A1P53007 AC233263.1-201ENST00000578059 224 ntBASIC16.83■□□□□ 0.28
SLC25A1P53007 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC25A1P53007 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.83■□□□□ 0.28
SLC25A1P53007 AL445675.2-201ENST00000620291 557 ntBASIC16.83■□□□□ 0.28
SLC25A1P53007 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SLC25A1P53007 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC25A1P53007 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC25A1P53007 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC25A1P53007 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC25A1P53007 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC25A1P53007 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC25A1P53007 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC25A1P53007 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC25A1P53007 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC25A1P53007 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC25A1P53007 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC25A1P53007 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC25A1P53007 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SLC25A1P53007 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC25A1P53007 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC25A1P53007 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC25A1P53007 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SLC25A1P53007 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
SLC25A1P53007 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC25A1P53007 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC25A1P53007 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC25A1P53007 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC25A1P53007 KRASP1-201ENST00000407852 552 ntBASIC16.82■□□□□ 0.28
SLC25A1P53007 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC25A1P53007 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC25A1P53007 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC25A1P53007 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
SLC25A1P53007 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC25A1P53007 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC25A1P53007 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.82■□□□□ 0.28
SLC25A1P53007 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SLC25A1P53007 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.82■□□□□ 0.28
SLC25A1P53007 AL023875.1-201ENST00000640777 796 ntBASIC16.82■□□□□ 0.28
SLC25A1P53007 AC068587.9-201ENST00000641814 219 ntBASIC16.82■□□□□ 0.28
SLC25A1P53007 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC25A1P53007 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC25A1P53007 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC25A1P53007 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SLC25A1P53007 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
SLC25A1P53007 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.82■□□□□ 0.28
SLC25A1P53007 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SLC25A1P53007 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SLC25A1P53007 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SLC25A1P53007 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC25A1P53007 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC25A1P53007 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.82■□□□□ 0.28
SLC25A1P53007 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC25A1P53007 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC25A1P53007 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC25A1P53007 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC25A1P53007 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC25A1P53007 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC25A1P53007 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC25A1P53007 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC25A1P53007 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.81■□□□□ 0.28
SLC25A1P53007 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SLC25A1P53007 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC25A1P53007 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC25A1P53007 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC25A1P53007 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC25A1P53007 HLA-L-209ENST00000420110 1011 ntBASIC16.81■□□□□ 0.28
SLC25A1P53007 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SLC25A1P53007 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC25A1P53007 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC25A1P53007 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.81■□□□□ 0.28
SLC25A1P53007 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SLC25A1P53007 PRSS44-201ENST00000515154 1146 ntBASIC16.81■□□□□ 0.28
SLC25A1P53007 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC25A1P53007 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.81■□□□□ 0.28
SLC25A1P53007 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.81■□□□□ 0.28
SLC25A1P53007 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.81■□□□□ 0.28
SLC25A1P53007 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC25A1P53007 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SLC25A1P53007 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC25A1P53007 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC25A1P53007 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC25A1P53007 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SLC25A1P53007 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
SLC25A1P53007 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SLC25A1P53007 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC25A1P53007 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC25A1P53007 KRT8P11-201ENST00000409686 1436 ntBASIC16.8■□□□□ 0.28
SLC25A1P53007 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC25A1P53007 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
SLC25A1P53007 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC25A1P53007 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC25A1P53007 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC25A1P53007 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC25A1P53007 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms