Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LBX1P52954 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LBX1P52954 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC21.41■■□□□ 1.02
LBX1P52954 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC21.41■■□□□ 1.02
LBX1P52954 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LBX1P52954 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
LBX1P52954 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC21.41■■□□□ 1.02
LBX1P52954 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
LBX1P52954 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC21.41■■□□□ 1.02
LBX1P52954 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
LBX1P52954 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
LBX1P52954 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.41■■□□□ 1.02
LBX1P52954 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LBX1P52954 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LBX1P52954 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LBX1P52954 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
LBX1P52954 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC21.4■■□□□ 1.02
LBX1P52954 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LBX1P52954 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LBX1P52954 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LBX1P52954 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
LBX1P52954 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LBX1P52954 BEX3-201ENST00000361298 921 ntTSL 2 BASIC21.4■■□□□ 1.02
LBX1P52954 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
LBX1P52954 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
LBX1P52954 CNN2P11-201ENST00000429351 262 ntBASIC21.4■■□□□ 1.02
LBX1P52954 AC007274.1-201ENST00000439805 662 ntBASIC21.4■■□□□ 1.02
LBX1P52954 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC21.4■■□□□ 1.02
LBX1P52954 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LBX1P52954 UNC93B6-202ENST00000528242 690 ntBASIC21.4■■□□□ 1.02
LBX1P52954 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC21.4■■□□□ 1.02
LBX1P52954 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC21.4■■□□□ 1.02
LBX1P52954 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC21.4■■□□□ 1.02
LBX1P52954 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC21.4■■□□□ 1.02
LBX1P52954 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LBX1P52954 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
LBX1P52954 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
LBX1P52954 KRT8P3-201ENST00000519669 1449 ntBASIC21.39■■□□□ 1.02
LBX1P52954 FP700111.2-201ENST00000619190 1892 ntBASIC21.39■■□□□ 1.02
LBX1P52954 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
LBX1P52954 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC21.39■■□□□ 1.02
LBX1P52954 AC063926.2-201ENST00000623766 1308 ntBASIC21.39■■□□□ 1.01
LBX1P52954 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.39■■□□□ 1.01
LBX1P52954 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LBX1P52954 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LBX1P52954 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LBX1P52954 RCN1P2-201ENST00000398357 915 ntBASIC21.39■■□□□ 1.01
LBX1P52954 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC21.39■■□□□ 1.01
LBX1P52954 YBX1P5-201ENST00000509441 847 ntBASIC21.39■■□□□ 1.01
LBX1P52954 OR7E14P-202ENST00000530490 1290 ntBASIC21.39■■□□□ 1.01
LBX1P52954 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LBX1P52954 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
LBX1P52954 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
LBX1P52954 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC21.39■■□□□ 1.01
LBX1P52954 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC21.39■■□□□ 1.01
LBX1P52954 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.39■■□□□ 1.01
LBX1P52954 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC21.39■■□□□ 1.01
LBX1P52954 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LBX1P52954 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LBX1P52954 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
LBX1P52954 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LBX1P52954 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LBX1P52954 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.39■■□□□ 1.01
LBX1P52954 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.39■■□□□ 1.01
LBX1P52954 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LBX1P52954 AL353692.3-201ENST00000407031 1396 ntBASIC21.38■■□□□ 1.01
LBX1P52954 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.38■■□□□ 1.01
LBX1P52954 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LBX1P52954 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
LBX1P52954 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
LBX1P52954 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LBX1P52954 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
LBX1P52954 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC21.38■■□□□ 1.01
LBX1P52954 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC21.38■■□□□ 1.01
LBX1P52954 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.38■■□□□ 1.01
LBX1P52954 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.38■■□□□ 1.01
LBX1P52954 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC21.38■■□□□ 1.01
LBX1P52954 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC21.38■■□□□ 1.01
LBX1P52954 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.38■■□□□ 1.01
LBX1P52954 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.38■■□□□ 1.01
LBX1P52954 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LBX1P52954 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.38■■□□□ 1.01
LBX1P52954 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.38■■□□□ 1.01
LBX1P52954 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
LBX1P52954 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LBX1P52954 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
LBX1P52954 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LBX1P52954 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.37■■□□□ 1.01
LBX1P52954 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LBX1P52954 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LBX1P52954 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LBX1P52954 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.37■■□□□ 1.01
LBX1P52954 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LBX1P52954 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LBX1P52954 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LBX1P52954 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC21.37■■□□□ 1.01
LBX1P52954 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LBX1P52954 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC21.37■■□□□ 1.01
LBX1P52954 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC21.37■■□□□ 1.01
LBX1P52954 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.37■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms