Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATF1P18846 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATF1P18846 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.63■□□□□ 0.25
ATF1P18846 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATF1P18846 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
ATF1P18846 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.63■□□□□ 0.25
ATF1P18846 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.63■□□□□ 0.25
ATF1P18846 PNMA6B-201ENST00000538162 1200 ntBASIC16.63■□□□□ 0.25
ATF1P18846 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.63■□□□□ 0.25
ATF1P18846 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.63■□□□□ 0.25
ATF1P18846 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATF1P18846 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATF1P18846 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ATF1P18846 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATF1P18846 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.63■□□□□ 0.25
ATF1P18846 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.63■□□□□ 0.25
ATF1P18846 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ATF1P18846 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.63■□□□□ 0.25
ATF1P18846 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATF1P18846 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ATF1P18846 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.63■□□□□ 0.25
ATF1P18846 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
ATF1P18846 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.63■□□□□ 0.25
ATF1P18846 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ATF1P18846 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATF1P18846 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ATF1P18846 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.63■□□□□ 0.25
ATF1P18846 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ATF1P18846 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.63■□□□□ 0.25
ATF1P18846 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.62■□□□□ 0.25
ATF1P18846 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.62■□□□□ 0.25
ATF1P18846 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
ATF1P18846 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATF1P18846 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATF1P18846 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATF1P18846 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATF1P18846 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATF1P18846 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATF1P18846 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATF1P18846 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.62■□□□□ 0.25
ATF1P18846 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATF1P18846 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.62■□□□□ 0.25
ATF1P18846 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
ATF1P18846 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.62■□□□□ 0.25
ATF1P18846 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATF1P18846 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATF1P18846 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATF1P18846 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ATF1P18846 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATF1P18846 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.61■□□□□ 0.25
ATF1P18846 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATF1P18846 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATF1P18846 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
ATF1P18846 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATF1P18846 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATF1P18846 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATF1P18846 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.61■□□□□ 0.25
ATF1P18846 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.61■□□□□ 0.25
ATF1P18846 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.61■□□□□ 0.25
ATF1P18846 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.61■□□□□ 0.25
ATF1P18846 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.61■□□□□ 0.25
ATF1P18846 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.61■□□□□ 0.25
ATF1P18846 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.61■□□□□ 0.25
ATF1P18846 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
ATF1P18846 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.61■□□□□ 0.25
ATF1P18846 AC120498.8-201ENST00000614275 531 ntBASIC16.61■□□□□ 0.25
ATF1P18846 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATF1P18846 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATF1P18846 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATF1P18846 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
ATF1P18846 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATF1P18846 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ATF1P18846 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATF1P18846 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATF1P18846 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ATF1P18846 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ATF1P18846 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.61■□□□□ 0.25
ATF1P18846 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ATF1P18846 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.6■□□□□ 0.25
ATF1P18846 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATF1P18846 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ATF1P18846 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATF1P18846 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATF1P18846 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.6■□□□□ 0.25
ATF1P18846 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATF1P18846 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATF1P18846 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.6■□□□□ 0.25
ATF1P18846 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.6■□□□□ 0.25
ATF1P18846 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATF1P18846 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATF1P18846 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATF1P18846 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATF1P18846 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATF1P18846 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.6■□□□□ 0.25
ATF1P18846 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ATF1P18846 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ATF1P18846 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.6■□□□□ 0.25
ATF1P18846 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.6■□□□□ 0.25
ATF1P18846 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.6■□□□□ 0.25
ATF1P18846 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms