Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.62■□□□□ 0.73
RHOP08100 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RHOP08100 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.62■□□□□ 0.73
RHOP08100 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RHOP08100 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RHOP08100 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.61■□□□□ 0.73
RHOP08100 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RHOP08100 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RHOP08100 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
RHOP08100 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RHOP08100 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RHOP08100 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RHOP08100 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RHOP08100 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RHOP08100 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RHOP08100 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RHOP08100 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.61■□□□□ 0.73
RHOP08100 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.61■□□□□ 0.73
RHOP08100 MIR3180-1-201ENST00000580374 94 ntBASIC19.61■□□□□ 0.73
RHOP08100 MIR3917-201ENST00000580971 93 ntBASIC19.61■□□□□ 0.73
RHOP08100 MIR3180-3-201ENST00000584616 94 ntBASIC19.61■□□□□ 0.73
RHOP08100 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.61■□□□□ 0.73
RHOP08100 AL136038.4-201ENST00000603606 1261 ntBASIC19.61■□□□□ 0.73
RHOP08100 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RHOP08100 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.61■□□□□ 0.73
RHOP08100 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RHOP08100 TREX1-205ENST00000625293 1783 ntBASIC19.61■□□□□ 0.73
RHOP08100 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.61■□□□□ 0.73
RHOP08100 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RHOP08100 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RHOP08100 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RHOP08100 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RHOP08100 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RHOP08100 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RHOP08100 TEX21P-204ENST00000641479 1693 ntBASIC19.61■□□□□ 0.73
RHOP08100 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RHOP08100 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.61■□□□□ 0.73
RHOP08100 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.61■□□□□ 0.73
RHOP08100 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.61■□□□□ 0.73
RHOP08100 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RHOP08100 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.61■□□□□ 0.73
RHOP08100 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RHOP08100 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RHOP08100 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.6■□□□□ 0.73
RHOP08100 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.6■□□□□ 0.73
RHOP08100 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RHOP08100 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RHOP08100 AP002383.4-201ENST00000442518 975 ntBASIC19.6■□□□□ 0.73
RHOP08100 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.6■□□□□ 0.73
RHOP08100 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RHOP08100 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.6■□□□□ 0.73
RHOP08100 PRELID1P1-202ENST00000567272 903 ntBASIC19.6■□□□□ 0.73
RHOP08100 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.6■□□□□ 0.73
RHOP08100 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.6■□□□□ 0.73
RHOP08100 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.6■□□□□ 0.73
RHOP08100 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.6■□□□□ 0.73
RHOP08100 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RHOP08100 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.6■□□□□ 0.73
RHOP08100 RCC2P3-201ENST00000418112 1537 ntBASIC19.6■□□□□ 0.73
RHOP08100 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RHOP08100 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RHOP08100 AL391807.1-203ENST00000604392 2365 ntBASIC19.59■□□□□ 0.73
RHOP08100 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RHOP08100 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.59■□□□□ 0.73
RHOP08100 AL109659.2-201ENST00000606809 1674 ntBASIC19.59■□□□□ 0.73
RHOP08100 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RHOP08100 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RHOP08100 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RHOP08100 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RHOP08100 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RHOP08100 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.59■□□□□ 0.73
RHOP08100 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.59■□□□□ 0.73
RHOP08100 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.59■□□□□ 0.73
RHOP08100 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RHOP08100 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RHOP08100 KRT8P26-201ENST00000534154 1276 ntBASIC19.59■□□□□ 0.73
RHOP08100 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RHOP08100 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RHOP08100 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
RHOP08100 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RHOP08100 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RHOP08100 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RHOP08100 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
RHOP08100 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RHOP08100 AL512353.2-201ENST00000448759 1962 ntBASIC19.59■□□□□ 0.73
RHOP08100 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RHOP08100 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
RHOP08100 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RHOP08100 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RHOP08100 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.58■□□□□ 0.73
RHOP08100 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.58■□□□□ 0.73
RHOP08100 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RHOP08100 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
RHOP08100 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RHOP08100 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RHOP08100 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.58■□□□□ 0.73
RHOP08100 AC008556.1-201ENST00000610908 2040 ntBASIC19.58■□□□□ 0.73
RHOP08100 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.58■□□□□ 0.73
RHOP08100 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RHOP08100 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms