Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.83□□□□□ -0.04
TOMM40O96008 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TOMM40O96008 AC104771.1-201ENST00000603335 964 ntBASIC14.83□□□□□ -0.04
TOMM40O96008 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TOMM40O96008 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TOMM40O96008 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TOMM40O96008 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.83□□□□□ -0.04
TOMM40O96008 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TOMM40O96008 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TOMM40O96008 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
TOMM40O96008 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TOMM40O96008 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TOMM40O96008 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TOMM40O96008 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TOMM40O96008 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TOMM40O96008 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TOMM40O96008 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TOMM40O96008 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TOMM40O96008 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.82□□□□□ -0.04
TOMM40O96008 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TOMM40O96008 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.82□□□□□ -0.04
TOMM40O96008 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.82□□□□□ -0.04
TOMM40O96008 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TOMM40O96008 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TOMM40O96008 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TOMM40O96008 AC106820.2-201ENST00000563775 3264 ntBASIC14.82□□□□□ -0.04
TOMM40O96008 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TOMM40O96008 AC090340.1-201ENST00000620778 4980 ntBASIC14.82□□□□□ -0.04
TOMM40O96008 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC14.82□□□□□ -0.04
TOMM40O96008 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TOMM40O96008 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC14.82□□□□□ -0.04
TOMM40O96008 TSPY21P-201ENST00000433481 731 ntBASIC14.82□□□□□ -0.04
TOMM40O96008 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC14.82□□□□□ -0.04
TOMM40O96008 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TOMM40O96008 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TOMM40O96008 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.82□□□□□ -0.04
TOMM40O96008 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TOMM40O96008 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC14.82□□□□□ -0.04
TOMM40O96008 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TOMM40O96008 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC14.82□□□□□ -0.04
TOMM40O96008 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
TOMM40O96008 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.82□□□□□ -0.04
TOMM40O96008 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TOMM40O96008 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC14.82□□□□□ -0.04
TOMM40O96008 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC14.82□□□□□ -0.04
TOMM40O96008 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TOMM40O96008 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TOMM40O96008 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
TOMM40O96008 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC14.82□□□□□ -0.04
TOMM40O96008 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TOMM40O96008 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
TOMM40O96008 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
TOMM40O96008 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.81□□□□□ -0.04
TOMM40O96008 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TOMM40O96008 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC14.81□□□□□ -0.04
TOMM40O96008 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC14.81□□□□□ -0.04
TOMM40O96008 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.81□□□□□ -0.04
TOMM40O96008 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TOMM40O96008 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TOMM40O96008 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TOMM40O96008 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TOMM40O96008 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC14.81□□□□□ -0.04
TOMM40O96008 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC14.81□□□□□ -0.04
TOMM40O96008 UNC93B5-201ENST00000530315 699 ntBASIC14.81□□□□□ -0.04
TOMM40O96008 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC14.81□□□□□ -0.04
TOMM40O96008 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC14.81□□□□□ -0.04
TOMM40O96008 AC004264.1-201ENST00000608354 794 ntBASIC14.81□□□□□ -0.04
TOMM40O96008 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TOMM40O96008 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TOMM40O96008 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.81□□□□□ -0.04
TOMM40O96008 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC14.81□□□□□ -0.04
TOMM40O96008 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TOMM40O96008 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TOMM40O96008 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TOMM40O96008 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TOMM40O96008 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
TOMM40O96008 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.81□□□□□ -0.04
TOMM40O96008 NBPF21P-201ENST00000425093 1451 ntBASIC14.81□□□□□ -0.04
TOMM40O96008 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
TOMM40O96008 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TOMM40O96008 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
TOMM40O96008 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TOMM40O96008 AC009113.1-201ENST00000570267 2443 ntBASIC14.81□□□□□ -0.04
TOMM40O96008 AL390961.4-201ENST00000623958 2535 ntBASIC14.81□□□□□ -0.04
TOMM40O96008 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TOMM40O96008 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC14.8□□□□□ -0.04
TOMM40O96008 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
TOMM40O96008 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TOMM40O96008 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TOMM40O96008 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.8□□□□□ -0.04
TOMM40O96008 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
TOMM40O96008 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.8□□□□□ -0.04
TOMM40O96008 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
TOMM40O96008 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TOMM40O96008 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TOMM40O96008 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TOMM40O96008 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TOMM40O96008 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
TOMM40O96008 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TOMM40O96008 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms