Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PEX1O43933 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PEX1O43933 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.44■□□□□ 0.54
PEX1O43933 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PEX1O43933 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PEX1O43933 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PEX1O43933 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PEX1O43933 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PEX1O43933 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PEX1O43933 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
PEX1O43933 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PEX1O43933 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PEX1O43933 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PEX1O43933 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PEX1O43933 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.43■□□□□ 0.54
PEX1O43933 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.43■□□□□ 0.54
PEX1O43933 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PEX1O43933 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PEX1O43933 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PEX1O43933 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.43■□□□□ 0.54
PEX1O43933 UBE2SP1-201ENST00000450587 669 ntBASIC18.43■□□□□ 0.54
PEX1O43933 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.43■□□□□ 0.54
PEX1O43933 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.43■□□□□ 0.54
PEX1O43933 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.43■□□□□ 0.54
PEX1O43933 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.43■□□□□ 0.54
PEX1O43933 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PEX1O43933 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PEX1O43933 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PEX1O43933 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PEX1O43933 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PEX1O43933 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PEX1O43933 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PEX1O43933 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
PEX1O43933 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PEX1O43933 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PEX1O43933 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PEX1O43933 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PEX1O43933 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PEX1O43933 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.42■□□□□ 0.54
PEX1O43933 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PEX1O43933 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
PEX1O43933 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PEX1O43933 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PEX1O43933 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PEX1O43933 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PEX1O43933 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PEX1O43933 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
PEX1O43933 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.42■□□□□ 0.54
PEX1O43933 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.42■□□□□ 0.54
PEX1O43933 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PEX1O43933 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PEX1O43933 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PEX1O43933 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PEX1O43933 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.42■□□□□ 0.54
PEX1O43933 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PEX1O43933 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.42■□□□□ 0.54
PEX1O43933 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PEX1O43933 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PEX1O43933 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PEX1O43933 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
PEX1O43933 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.41■□□□□ 0.54
PEX1O43933 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PEX1O43933 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PEX1O43933 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.41■□□□□ 0.54
PEX1O43933 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.41■□□□□ 0.54
PEX1O43933 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PEX1O43933 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PEX1O43933 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PEX1O43933 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PEX1O43933 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.41■□□□□ 0.54
PEX1O43933 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PEX1O43933 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PEX1O43933 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PEX1O43933 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.41■□□□□ 0.54
PEX1O43933 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
PEX1O43933 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.41■□□□□ 0.54
PEX1O43933 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.41■□□□□ 0.54
PEX1O43933 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.41■□□□□ 0.54
PEX1O43933 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PEX1O43933 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.41■□□□□ 0.54
PEX1O43933 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PEX1O43933 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PEX1O43933 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.41■□□□□ 0.54
PEX1O43933 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PEX1O43933 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PEX1O43933 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.41■□□□□ 0.54
PEX1O43933 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PEX1O43933 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PEX1O43933 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.41■□□□□ 0.54
PEX1O43933 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PEX1O43933 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PEX1O43933 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PEX1O43933 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PEX1O43933 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PEX1O43933 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
PEX1O43933 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PEX1O43933 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.4■□□□□ 0.54
PEX1O43933 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PEX1O43933 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PEX1O43933 AP001271.2-201ENST00000624018 1556 ntBASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms