Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTCAO00442 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RTCAO00442 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.07■□□□□ 0.48
RTCAO00442 AP003071.4-201ENST00000562276 1284 ntBASIC18.07■□□□□ 0.48
RTCAO00442 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.07■□□□□ 0.48
RTCAO00442 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.07■□□□□ 0.48
RTCAO00442 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RTCAO00442 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
RTCAO00442 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RTCAO00442 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTCAO00442 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.07■□□□□ 0.48
RTCAO00442 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RTCAO00442 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTCAO00442 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.06■□□□□ 0.48
RTCAO00442 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTCAO00442 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.06■□□□□ 0.48
RTCAO00442 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTCAO00442 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
RTCAO00442 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RTCAO00442 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTCAO00442 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTCAO00442 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RTCAO00442 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTCAO00442 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTCAO00442 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
RTCAO00442 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
RTCAO00442 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
RTCAO00442 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTCAO00442 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.06■□□□□ 0.48
RTCAO00442 PRSS44-201ENST00000515154 1146 ntBASIC18.06■□□□□ 0.48
RTCAO00442 AP000692.2-201ENST00000608391 879 ntBASIC18.06■□□□□ 0.48
RTCAO00442 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
RTCAO00442 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
RTCAO00442 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
RTCAO00442 CROCCP3-202ENST00000420820 1947 ntBASIC18.06■□□□□ 0.48
RTCAO00442 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTCAO00442 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTCAO00442 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTCAO00442 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTCAO00442 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RTCAO00442 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTCAO00442 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RTCAO00442 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
RTCAO00442 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
RTCAO00442 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTCAO00442 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTCAO00442 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RTCAO00442 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.05■□□□□ 0.48
RTCAO00442 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.05■□□□□ 0.48
RTCAO00442 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.05■□□□□ 0.48
RTCAO00442 CKBP1-201ENST00000565489 1086 ntBASIC18.05■□□□□ 0.48
RTCAO00442 SLC25A1P4-201ENST00000567977 778 ntBASIC18.05■□□□□ 0.48
RTCAO00442 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.05■□□□□ 0.48
RTCAO00442 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.05■□□□□ 0.48
RTCAO00442 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.05■□□□□ 0.48
RTCAO00442 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.05■□□□□ 0.48
RTCAO00442 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.05■□□□□ 0.48
RTCAO00442 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
RTCAO00442 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.05■□□□□ 0.48
RTCAO00442 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTCAO00442 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.05■□□□□ 0.48
RTCAO00442 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.05■□□□□ 0.48
RTCAO00442 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RTCAO00442 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RTCAO00442 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RTCAO00442 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTCAO00442 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RTCAO00442 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
RTCAO00442 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTCAO00442 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTCAO00442 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTCAO00442 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTCAO00442 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTCAO00442 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
RTCAO00442 AC093827.2-201ENST00000512654 315 ntBASIC18.04■□□□□ 0.48
RTCAO00442 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.04■□□□□ 0.48
RTCAO00442 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.04■□□□□ 0.48
RTCAO00442 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
RTCAO00442 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.04■□□□□ 0.48
RTCAO00442 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.04■□□□□ 0.48
RTCAO00442 AC066615.1-201ENST00000640911 628 ntBASIC18.04■□□□□ 0.48
RTCAO00442 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTCAO00442 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
RTCAO00442 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTCAO00442 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RTCAO00442 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RTCAO00442 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTCAO00442 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTCAO00442 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.03■□□□□ 0.48
RTCAO00442 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.03■□□□□ 0.48
RTCAO00442 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTCAO00442 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTCAO00442 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTCAO00442 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RTCAO00442 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RTCAO00442 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.03■□□□□ 0.48
RTCAO00442 AC097488.1-201ENST00000507834 756 ntBASIC18.03■□□□□ 0.48
RTCAO00442 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.03■□□□□ 0.48
RTCAO00442 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.03■□□□□ 0.48
RTCAO00442 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms