Protein–RNA interactions for Protein: B2RUZ4

SMIM1, Small integral membrane protein 1, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM1B2RUZ4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SMIM1B2RUZ4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 RER1-204ENST00000378518 522 ntTSL 3 BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 AL512625.2-201ENST00000417533 625 ntBASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 AC231657.2-201ENST00000624556 255 ntBASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SMIM1B2RUZ4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 AC124283.5-201ENST00000624661 1809 ntBASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 AC007322.1-201ENST00000426983 750 ntBASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 AC005829.2-201ENST00000571422 1056 ntBASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 AC005181.1-201ENST00000604782 1256 ntBASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM1B2RUZ4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC12.8□□□□□ -0.36
SMIM1B2RUZ4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM1B2RUZ4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
SMIM1B2RUZ4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
SMIM1B2RUZ4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC12.8□□□□□ -0.36
SMIM1B2RUZ4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms