Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01548A6NM66 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC01548A6NM66 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC14.94□□□□□ -0.02
LINC01548A6NM66 TSPY17P-201ENST00000450329 467 ntBASIC14.94□□□□□ -0.02
LINC01548A6NM66 CA15P1-201ENST00000481698 905 ntBASIC14.94□□□□□ -0.02
LINC01548A6NM66 AC128688.1-201ENST00000487626 519 ntBASIC14.94□□□□□ -0.02
LINC01548A6NM66 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01548A6NM66 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01548A6NM66 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01548A6NM66 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
LINC01548A6NM66 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01548A6NM66 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01548A6NM66 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01548A6NM66 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01548A6NM66 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01548A6NM66 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC14.94□□□□□ -0.02
LINC01548A6NM66 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01548A6NM66 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01548A6NM66 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LINC01548A6NM66 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
LINC01548A6NM66 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC01548A6NM66 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
LINC01548A6NM66 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LINC01548A6NM66 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01548A6NM66 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
LINC01548A6NM66 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01548A6NM66 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01548A6NM66 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01548A6NM66 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01548A6NM66 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01548A6NM66 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
LINC01548A6NM66 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01548A6NM66 SLC25A3P1-201ENST00000443844 931 ntBASIC14.93□□□□□ -0.02
LINC01548A6NM66 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC14.93□□□□□ -0.02
LINC01548A6NM66 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC01548A6NM66 KRT18P21-201ENST00000515767 1272 ntBASIC14.93□□□□□ -0.02
LINC01548A6NM66 AC010203.1-204ENST00000548782 407 ntBASIC14.93□□□□□ -0.02
LINC01548A6NM66 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC01548A6NM66 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC01548A6NM66 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LINC01548A6NM66 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
LINC01548A6NM66 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01548A6NM66 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01548A6NM66 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.93□□□□□ -0.02
LINC01548A6NM66 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.93□□□□□ -0.02
LINC01548A6NM66 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.93□□□□□ -0.02
LINC01548A6NM66 AC005363.2-201ENST00000618631 242 ntBASIC14.93□□□□□ -0.02
LINC01548A6NM66 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.93□□□□□ -0.02
LINC01548A6NM66 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
LINC01548A6NM66 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01548A6NM66 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01548A6NM66 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LINC01548A6NM66 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01548A6NM66 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01548A6NM66 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01548A6NM66 STX6-204ENST00000542060 4809 ntTSL 2 BASIC14.93□□□□□ -0.02
LINC01548A6NM66 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01548A6NM66 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01548A6NM66 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LINC01548A6NM66 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01548A6NM66 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC01548A6NM66 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01548A6NM66 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.92□□□□□ -0.02
LINC01548A6NM66 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01548A6NM66 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01548A6NM66 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
LINC01548A6NM66 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01548A6NM66 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01548A6NM66 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01548A6NM66 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LINC01548A6NM66 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01548A6NM66 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01548A6NM66 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC01548A6NM66 AC005521.1-201ENST00000393351 872 ntBASIC14.92□□□□□ -0.02
LINC01548A6NM66 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC01548A6NM66 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.92□□□□□ -0.02
LINC01548A6NM66 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC01548A6NM66 MIR4674-201ENST00000582457 87 ntBASIC14.92□□□□□ -0.02
LINC01548A6NM66 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01548A6NM66 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC14.92□□□□□ -0.02
LINC01548A6NM66 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01548A6NM66 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01548A6NM66 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01548A6NM66 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC14.92□□□□□ -0.02
LINC01548A6NM66 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01548A6NM66 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01548A6NM66 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01548A6NM66 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01548A6NM66 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01548A6NM66 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LINC01548A6NM66 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LINC01548A6NM66 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LINC01548A6NM66 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC14.92□□□□□ -0.02
LINC01548A6NM66 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01548A6NM66 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LINC01548A6NM66 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LINC01548A6NM66 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC14.91□□□□□ -0.02
LINC01548A6NM66 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC14.91□□□□□ -0.02
LINC01548A6NM66 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC14.91□□□□□ -0.02
LINC01548A6NM66 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms