Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV12-3A0A0B4J271 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV12-3A0A0B4J271 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV12-3A0A0B4J271 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
TRAV12-3A0A0B4J271 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV12-3A0A0B4J271 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV12-3A0A0B4J271 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV12-3A0A0B4J271 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV12-3A0A0B4J271 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
TRAV12-3A0A0B4J271 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV12-3A0A0B4J271 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV12-3A0A0B4J271 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV12-3A0A0B4J271 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV12-3A0A0B4J271 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV12-3A0A0B4J271 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV12-3A0A0B4J271 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV12-3A0A0B4J271 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV12-3A0A0B4J271 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
TRAV12-3A0A0B4J271 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.11□□□□□ -0.15
TRAV12-3A0A0B4J271 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
TRAV12-3A0A0B4J271 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
TRAV12-3A0A0B4J271 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC14.11□□□□□ -0.15
TRAV12-3A0A0B4J271 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV12-3A0A0B4J271 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
TRAV12-3A0A0B4J271 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAV12-3A0A0B4J271 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV12-3A0A0B4J271 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV12-3A0A0B4J271 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
TRAV12-3A0A0B4J271 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV12-3A0A0B4J271 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV12-3A0A0B4J271 CROCCP3-202ENST00000420820 1947 ntBASIC14.1□□□□□ -0.15
TRAV12-3A0A0B4J271 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV12-3A0A0B4J271 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV12-3A0A0B4J271 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV12-3A0A0B4J271 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAV12-3A0A0B4J271 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV12-3A0A0B4J271 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV12-3A0A0B4J271 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV12-3A0A0B4J271 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV12-3A0A0B4J271 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAV12-3A0A0B4J271 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV12-3A0A0B4J271 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC14.1□□□□□ -0.15
TRAV12-3A0A0B4J271 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV12-3A0A0B4J271 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
TRAV12-3A0A0B4J271 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV12-3A0A0B4J271 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV12-3A0A0B4J271 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAV12-3A0A0B4J271 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV12-3A0A0B4J271 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
TRAV12-3A0A0B4J271 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV12-3A0A0B4J271 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV12-3A0A0B4J271 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 AC026366.1-201ENST00000488803 879 ntBASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 AC069544.1-201ENST00000609399 999 ntBASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV12-3A0A0B4J271 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.08□□□□□ -0.15
TRAV12-3A0A0B4J271 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV12-3A0A0B4J271 UBQLN4P1-201ENST00000461599 1801 ntBASIC14.08□□□□□ -0.15
TRAV12-3A0A0B4J271 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC14.08□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms