Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV20-1A0A075B6N2 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV20-1A0A075B6N2 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV20-1A0A075B6N2 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV20-1A0A075B6N2 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV20-1A0A075B6N2 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV20-1A0A075B6N2 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC12.66□□□□□ -0.38
TRBV20-1A0A075B6N2 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
TRBV20-1A0A075B6N2 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC12.66□□□□□ -0.38
TRBV20-1A0A075B6N2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV20-1A0A075B6N2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV20-1A0A075B6N2 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC12.66□□□□□ -0.38
TRBV20-1A0A075B6N2 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV20-1A0A075B6N2 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
TRBV20-1A0A075B6N2 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 AC103702.1-201ENST00000548801 2630 ntBASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 AL136379.1-201ENST00000623471 2642 ntBASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 OVCH1-AS1-204ENST00000641955 5529 ntBASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 KRT18P24-201ENST00000344739 1156 ntBASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 AC133637.1-201ENST00000624115 1537 ntBASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TRBV20-1A0A075B6N2 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
TRBV20-1A0A075B6N2 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.39
TRBV20-1A0A075B6N2 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
TRBV20-1A0A075B6N2 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
TRBV20-1A0A075B6N2 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.39
TRBV20-1A0A075B6N2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
TRBV20-1A0A075B6N2 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
TRBV20-1A0A075B6N2 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC12.65□□□□□ -0.39
TRBV20-1A0A075B6N2 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
TRBV20-1A0A075B6N2 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV20-1A0A075B6N2 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV20-1A0A075B6N2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV20-1A0A075B6N2 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV20-1A0A075B6N2 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC12.64□□□□□ -0.39
TRBV20-1A0A075B6N2 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV20-1A0A075B6N2 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV20-1A0A075B6N2 HYMAI-201ENST00000635591 3347 ntBASIC12.64□□□□□ -0.39
TRBV20-1A0A075B6N2 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
TRBV20-1A0A075B6N2 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
TRBV20-1A0A075B6N2 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV20-1A0A075B6N2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC12.64□□□□□ -0.39
TRBV20-1A0A075B6N2 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV20-1A0A075B6N2 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV20-1A0A075B6N2 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC12.64□□□□□ -0.39
TRBV20-1A0A075B6N2 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC12.64□□□□□ -0.39
TRBV20-1A0A075B6N2 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV20-1A0A075B6N2 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV20-1A0A075B6N2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TRBV20-1A0A075B6N2 MIR6722-201ENST00000617286 78 ntBASIC12.64□□□□□ -0.39
TRBV20-1A0A075B6N2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC12.64□□□□□ -0.39
TRBV20-1A0A075B6N2 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC12.64□□□□□ -0.39
TRBV20-1A0A075B6N2 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms