Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
YIPF1Q9Y548 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
YIPF1Q9Y548 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.82■□□□□ 0.76
YIPF1Q9Y548 SPDYE13P-201ENST00000445314 798 ntBASIC19.82■□□□□ 0.76
YIPF1Q9Y548 AC034232.1-201ENST00000506026 1064 ntBASIC19.82■□□□□ 0.76
YIPF1Q9Y548 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.82■□□□□ 0.76
YIPF1Q9Y548 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
YIPF1Q9Y548 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
YIPF1Q9Y548 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
YIPF1Q9Y548 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.82■□□□□ 0.76
YIPF1Q9Y548 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.82■□□□□ 0.76
YIPF1Q9Y548 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.82■□□□□ 0.76
YIPF1Q9Y548 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
YIPF1Q9Y548 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
YIPF1Q9Y548 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
YIPF1Q9Y548 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
YIPF1Q9Y548 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
YIPF1Q9Y548 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
YIPF1Q9Y548 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
YIPF1Q9Y548 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
YIPF1Q9Y548 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
YIPF1Q9Y548 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.81■□□□□ 0.76
YIPF1Q9Y548 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.81■□□□□ 0.76
YIPF1Q9Y548 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.81■□□□□ 0.76
YIPF1Q9Y548 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
YIPF1Q9Y548 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
YIPF1Q9Y548 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.81■□□□□ 0.76
YIPF1Q9Y548 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
YIPF1Q9Y548 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
YIPF1Q9Y548 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.81■□□□□ 0.76
YIPF1Q9Y548 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.81■□□□□ 0.76
YIPF1Q9Y548 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.81■□□□□ 0.76
YIPF1Q9Y548 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
YIPF1Q9Y548 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
YIPF1Q9Y548 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
YIPF1Q9Y548 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
YIPF1Q9Y548 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
YIPF1Q9Y548 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
YIPF1Q9Y548 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
YIPF1Q9Y548 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
YIPF1Q9Y548 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.81■□□□□ 0.76
YIPF1Q9Y548 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
YIPF1Q9Y548 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
YIPF1Q9Y548 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
YIPF1Q9Y548 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
YIPF1Q9Y548 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
YIPF1Q9Y548 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
YIPF1Q9Y548 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
YIPF1Q9Y548 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
YIPF1Q9Y548 HBZP1-201ENST00000354915 429 ntBASIC19.8■□□□□ 0.76
YIPF1Q9Y548 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
YIPF1Q9Y548 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.8■□□□□ 0.76
YIPF1Q9Y548 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
YIPF1Q9Y548 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
YIPF1Q9Y548 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.8■□□□□ 0.76
YIPF1Q9Y548 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.8■□□□□ 0.76
YIPF1Q9Y548 AC069148.1-201ENST00000608741 768 ntBASIC19.8■□□□□ 0.76
YIPF1Q9Y548 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
YIPF1Q9Y548 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
YIPF1Q9Y548 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
YIPF1Q9Y548 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.8■□□□□ 0.76
YIPF1Q9Y548 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.8■□□□□ 0.76
YIPF1Q9Y548 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
YIPF1Q9Y548 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.8■□□□□ 0.76
YIPF1Q9Y548 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.8■□□□□ 0.76
YIPF1Q9Y548 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
YIPF1Q9Y548 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
YIPF1Q9Y548 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
YIPF1Q9Y548 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
YIPF1Q9Y548 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.8■□□□□ 0.76
YIPF1Q9Y548 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
YIPF1Q9Y548 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.79■□□□□ 0.76
YIPF1Q9Y548 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
YIPF1Q9Y548 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
YIPF1Q9Y548 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
YIPF1Q9Y548 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.79■□□□□ 0.76
YIPF1Q9Y548 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.79■□□□□ 0.76
YIPF1Q9Y548 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
YIPF1Q9Y548 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
YIPF1Q9Y548 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
YIPF1Q9Y548 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
YIPF1Q9Y548 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
YIPF1Q9Y548 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
YIPF1Q9Y548 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
YIPF1Q9Y548 AC092597.1-201ENST00000487352 616 ntBASIC19.79■□□□□ 0.76
YIPF1Q9Y548 KRT18P56-201ENST00000507275 550 ntBASIC19.79■□□□□ 0.76
YIPF1Q9Y548 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
YIPF1Q9Y548 RCC2P3-201ENST00000418112 1537 ntBASIC19.79■□□□□ 0.76
YIPF1Q9Y548 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
YIPF1Q9Y548 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
YIPF1Q9Y548 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
YIPF1Q9Y548 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
YIPF1Q9Y548 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
YIPF1Q9Y548 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
YIPF1Q9Y548 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
YIPF1Q9Y548 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
YIPF1Q9Y548 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
YIPF1Q9Y548 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
YIPF1Q9Y548 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
YIPF1Q9Y548 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms