Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRCH1Q9Y2L9 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
LRCH1Q9Y2L9 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRCH1Q9Y2L9 AC135776.1-201ENST00000319817 2481 ntBASIC18.02■□□□□ 0.48
LRCH1Q9Y2L9 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRCH1Q9Y2L9 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.02■□□□□ 0.48
LRCH1Q9Y2L9 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRCH1Q9Y2L9 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRCH1Q9Y2L9 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
LRCH1Q9Y2L9 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRCH1Q9Y2L9 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.02■□□□□ 0.48
LRCH1Q9Y2L9 KRT18P14-201ENST00000534205 1250 ntBASIC18.02■□□□□ 0.48
LRCH1Q9Y2L9 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
LRCH1Q9Y2L9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.02■□□□□ 0.48
LRCH1Q9Y2L9 AC008175.2-201ENST00000612840 297 ntBASIC18.02■□□□□ 0.48
LRCH1Q9Y2L9 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
LRCH1Q9Y2L9 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.02■□□□□ 0.48
LRCH1Q9Y2L9 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
LRCH1Q9Y2L9 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRCH1Q9Y2L9 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRCH1Q9Y2L9 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.02■□□□□ 0.47
LRCH1Q9Y2L9 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LRCH1Q9Y2L9 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRCH1Q9Y2L9 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRCH1Q9Y2L9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
LRCH1Q9Y2L9 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRCH1Q9Y2L9 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
LRCH1Q9Y2L9 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.02■□□□□ 0.47
LRCH1Q9Y2L9 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 DUX4L2-201ENST00000561772 1275 ntBASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 FAM21FP-204ENST00000608637 956 ntBASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 DUX4L6-201ENST00000626483 1275 ntBASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 DUX4L1-201ENST00000627662 1275 ntBASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 DUX4L8-201ENST00000629013 1275 ntBASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 DUX4L3-201ENST00000630187 1275 ntBASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 DUX4L7-201ENST00000630678 1275 ntBASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 DUX4L5-201ENST00000630834 1275 ntBASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 OR6D1P-202ENST00000641007 5290 ntBASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LRCH1Q9Y2L9 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
LRCH1Q9Y2L9 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
LRCH1Q9Y2L9 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRCH1Q9Y2L9 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
LRCH1Q9Y2L9 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
LRCH1Q9Y2L9 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
LRCH1Q9Y2L9 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18■□□□□ 0.47
LRCH1Q9Y2L9 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18■□□□□ 0.47
LRCH1Q9Y2L9 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18■□□□□ 0.47
LRCH1Q9Y2L9 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRCH1Q9Y2L9 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRCH1Q9Y2L9 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18■□□□□ 0.47
LRCH1Q9Y2L9 SLC25A6P5-201ENST00000435663 894 ntBASIC18■□□□□ 0.47
LRCH1Q9Y2L9 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC18■□□□□ 0.47
LRCH1Q9Y2L9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRCH1Q9Y2L9 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18■□□□□ 0.47
LRCH1Q9Y2L9 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18■□□□□ 0.47
LRCH1Q9Y2L9 TPRG1LP1-201ENST00000598702 760 ntBASIC18■□□□□ 0.47
LRCH1Q9Y2L9 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
LRCH1Q9Y2L9 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18■□□□□ 0.47
LRCH1Q9Y2L9 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRCH1Q9Y2L9 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRCH1Q9Y2L9 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
LRCH1Q9Y2L9 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18■□□□□ 0.47
LRCH1Q9Y2L9 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.99■□□□□ 0.47
LRCH1Q9Y2L9 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRCH1Q9Y2L9 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRCH1Q9Y2L9 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRCH1Q9Y2L9 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
LRCH1Q9Y2L9 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.99■□□□□ 0.47
LRCH1Q9Y2L9 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
LRCH1Q9Y2L9 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRCH1Q9Y2L9 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRCH1Q9Y2L9 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
LRCH1Q9Y2L9 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms