Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 GAS7-202ENST00000396115 929 ntTSL 5 BASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 AC006333.2-201ENST00000607957 2099 ntBASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 WIZP1-201ENST00000531444 2299 ntBASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HHLA3Q9XRX5 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 KRT17P3-201ENST00000420566 1262 ntBASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 POM121L13P-201ENST00000422362 380 ntBASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 PNN-205ENST00000556530 601 ntTSL 2 BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 AL121829.2-201ENST00000620908 328 ntBASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 TBCB-214ENST00000629269 413 ntTSL 5 BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 AC012313.1-201ENST00000593393 3059 ntBASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
HHLA3Q9XRX5 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 AP006587.1-201ENST00000534129 1502 ntBASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 AC067852.2-201ENST00000590513 2313 ntBASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 PRORSD1P-202ENST00000563365 2154 ntBASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 PRKY-204ENST00000533551 1019 ntBASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 EFTUD1P1-204ENST00000560401 1798 ntBASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HHLA3Q9XRX5 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms