Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPTLC3Q9NUV7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.89■□□□□ 0.93
SPTLC3Q9NUV7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPTLC3Q9NUV7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.89■□□□□ 0.93
SPTLC3Q9NUV7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SPTLC3Q9NUV7 TFP1-202ENST00000475455 1573 ntBASIC20.89■□□□□ 0.93
SPTLC3Q9NUV7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPTLC3Q9NUV7 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SPTLC3Q9NUV7 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPTLC3Q9NUV7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPTLC3Q9NUV7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPTLC3Q9NUV7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPTLC3Q9NUV7 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.88■□□□□ 0.93
SPTLC3Q9NUV7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.88■□□□□ 0.93
SPTLC3Q9NUV7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPTLC3Q9NUV7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.88■□□□□ 0.93
SPTLC3Q9NUV7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPTLC3Q9NUV7 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.88■□□□□ 0.93
SPTLC3Q9NUV7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.88■□□□□ 0.93
SPTLC3Q9NUV7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPTLC3Q9NUV7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.88■□□□□ 0.93
SPTLC3Q9NUV7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SPTLC3Q9NUV7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPTLC3Q9NUV7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SPTLC3Q9NUV7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPTLC3Q9NUV7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPTLC3Q9NUV7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.88■□□□□ 0.93
SPTLC3Q9NUV7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPTLC3Q9NUV7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SPTLC3Q9NUV7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SPTLC3Q9NUV7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPTLC3Q9NUV7 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPTLC3Q9NUV7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SPTLC3Q9NUV7 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
SPTLC3Q9NUV7 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SPTLC3Q9NUV7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPTLC3Q9NUV7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPTLC3Q9NUV7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SPTLC3Q9NUV7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.87■□□□□ 0.93
SPTLC3Q9NUV7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SPTLC3Q9NUV7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SPTLC3Q9NUV7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SPTLC3Q9NUV7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.87■□□□□ 0.93
SPTLC3Q9NUV7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPTLC3Q9NUV7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.87■□□□□ 0.93
SPTLC3Q9NUV7 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SPTLC3Q9NUV7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.87■□□□□ 0.93
SPTLC3Q9NUV7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SPTLC3Q9NUV7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SPTLC3Q9NUV7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPTLC3Q9NUV7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPTLC3Q9NUV7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SPTLC3Q9NUV7 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SPTLC3Q9NUV7 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPTLC3Q9NUV7 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.86■□□□□ 0.93
SPTLC3Q9NUV7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.86■□□□□ 0.93
SPTLC3Q9NUV7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPTLC3Q9NUV7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPTLC3Q9NUV7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SPTLC3Q9NUV7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPTLC3Q9NUV7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SPTLC3Q9NUV7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SPTLC3Q9NUV7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPTLC3Q9NUV7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.86■□□□□ 0.93
SPTLC3Q9NUV7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPTLC3Q9NUV7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SPTLC3Q9NUV7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.86■□□□□ 0.93
SPTLC3Q9NUV7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPTLC3Q9NUV7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.86■□□□□ 0.93
SPTLC3Q9NUV7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.86■□□□□ 0.93
SPTLC3Q9NUV7 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPTLC3Q9NUV7 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SPTLC3Q9NUV7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SPTLC3Q9NUV7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SPTLC3Q9NUV7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.85■□□□□ 0.93
SPTLC3Q9NUV7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SPTLC3Q9NUV7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPTLC3Q9NUV7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SPTLC3Q9NUV7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPTLC3Q9NUV7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPTLC3Q9NUV7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPTLC3Q9NUV7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPTLC3Q9NUV7 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SPTLC3Q9NUV7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.85■□□□□ 0.93
SPTLC3Q9NUV7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPTLC3Q9NUV7 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.85■□□□□ 0.93
SPTLC3Q9NUV7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SPTLC3Q9NUV7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPTLC3Q9NUV7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SPTLC3Q9NUV7 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
SPTLC3Q9NUV7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SPTLC3Q9NUV7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SPTLC3Q9NUV7 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SPTLC3Q9NUV7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SPTLC3Q9NUV7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
SPTLC3Q9NUV7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.84■□□□□ 0.93
SPTLC3Q9NUV7 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SPTLC3Q9NUV7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SPTLC3Q9NUV7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC20.84■□□□□ 0.93
SPTLC3Q9NUV7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms