Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
SMCO4Q9NRQ5 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMCO4Q9NRQ5 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SMCO4Q9NRQ5 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMCO4Q9NRQ5 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMCO4Q9NRQ5 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMCO4Q9NRQ5 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMCO4Q9NRQ5 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMCO4Q9NRQ5 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.91□□□□□ -0.02
SMCO4Q9NRQ5 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMCO4Q9NRQ5 AP004607.4-201ENST00000530158 1459 ntBASIC14.91□□□□□ -0.02
SMCO4Q9NRQ5 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMCO4Q9NRQ5 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMCO4Q9NRQ5 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMCO4Q9NRQ5 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SMCO4Q9NRQ5 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC14.91□□□□□ -0.02
SMCO4Q9NRQ5 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.91□□□□□ -0.02
SMCO4Q9NRQ5 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SMCO4Q9NRQ5 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SMCO4Q9NRQ5 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMCO4Q9NRQ5 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMCO4Q9NRQ5 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMCO4Q9NRQ5 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMCO4Q9NRQ5 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SMCO4Q9NRQ5 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SMCO4Q9NRQ5 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SMCO4Q9NRQ5 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
SMCO4Q9NRQ5 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMCO4Q9NRQ5 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMCO4Q9NRQ5 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC14.91□□□□□ -0.02
SMCO4Q9NRQ5 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
SMCO4Q9NRQ5 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC14.91□□□□□ -0.02
SMCO4Q9NRQ5 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
SMCO4Q9NRQ5 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.91□□□□□ -0.02
SMCO4Q9NRQ5 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SMCO4Q9NRQ5 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 RPS2-202ENST00000526522 924 ntTSL 2 BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 KRT8P36-201ENST00000489121 1440 ntBASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.9□□□□□ -0.02
SMCO4Q9NRQ5 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms