Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SLC52A3Q9NQ40 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC52A3Q9NQ40 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
SLC52A3Q9NQ40 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC52A3Q9NQ40 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC52A3Q9NQ40 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC52A3Q9NQ40 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC52A3Q9NQ40 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC52A3Q9NQ40 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC52A3Q9NQ40 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC52A3Q9NQ40 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC52A3Q9NQ40 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC52A3Q9NQ40 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC52A3Q9NQ40 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC52A3Q9NQ40 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC52A3Q9NQ40 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.97■□□□□ 0.47
SLC52A3Q9NQ40 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC52A3Q9NQ40 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC52A3Q9NQ40 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC52A3Q9NQ40 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC52A3Q9NQ40 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC52A3Q9NQ40 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.97■□□□□ 0.47
SLC52A3Q9NQ40 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.97■□□□□ 0.47
SLC52A3Q9NQ40 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC52A3Q9NQ40 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SLC52A3Q9NQ40 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC52A3Q9NQ40 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC52A3Q9NQ40 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC52A3Q9NQ40 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC52A3Q9NQ40 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC52A3Q9NQ40 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC52A3Q9NQ40 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
SLC52A3Q9NQ40 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.97■□□□□ 0.47
SLC52A3Q9NQ40 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SLC52A3Q9NQ40 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC52A3Q9NQ40 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC52A3Q9NQ40 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC52A3Q9NQ40 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC52A3Q9NQ40 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC52A3Q9NQ40 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC52A3Q9NQ40 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC52A3Q9NQ40 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
SLC52A3Q9NQ40 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SLC52A3Q9NQ40 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC52A3Q9NQ40 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC52A3Q9NQ40 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC52A3Q9NQ40 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC52A3Q9NQ40 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC52A3Q9NQ40 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC52A3Q9NQ40 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC52A3Q9NQ40 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.96■□□□□ 0.47
SLC52A3Q9NQ40 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC52A3Q9NQ40 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC52A3Q9NQ40 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC52A3Q9NQ40 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC52A3Q9NQ40 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SLC52A3Q9NQ40 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.96■□□□□ 0.47
SLC52A3Q9NQ40 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC52A3Q9NQ40 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC52A3Q9NQ40 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC52A3Q9NQ40 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
SLC52A3Q9NQ40 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC52A3Q9NQ40 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SLC52A3Q9NQ40 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC52A3Q9NQ40 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SLC52A3Q9NQ40 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.96■□□□□ 0.47
SLC52A3Q9NQ40 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
SLC52A3Q9NQ40 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
SLC52A3Q9NQ40 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
SLC52A3Q9NQ40 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SLC52A3Q9NQ40 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC52A3Q9NQ40 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC52A3Q9NQ40 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.95■□□□□ 0.46
SLC52A3Q9NQ40 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SLC52A3Q9NQ40 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC52A3Q9NQ40 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC52A3Q9NQ40 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC52A3Q9NQ40 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SLC52A3Q9NQ40 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC52A3Q9NQ40 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC52A3Q9NQ40 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.95■□□□□ 0.46
SLC52A3Q9NQ40 POU5F1P3-201ENST00000428824 1078 ntBASIC17.95■□□□□ 0.46
SLC52A3Q9NQ40 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SLC52A3Q9NQ40 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC52A3Q9NQ40 AL138781.1-201ENST00000566567 1274 ntBASIC17.95■□□□□ 0.46
SLC52A3Q9NQ40 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.95■□□□□ 0.46
SLC52A3Q9NQ40 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC52A3Q9NQ40 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SLC52A3Q9NQ40 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC52A3Q9NQ40 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.95■□□□□ 0.46
SLC52A3Q9NQ40 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SLC52A3Q9NQ40 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
SLC52A3Q9NQ40 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC52A3Q9NQ40 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.95■□□□□ 0.46
SLC52A3Q9NQ40 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SLC52A3Q9NQ40 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.95■□□□□ 0.46
SLC52A3Q9NQ40 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SLC52A3Q9NQ40 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC52A3Q9NQ40 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SLC52A3Q9NQ40 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms