Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 AP003097.1-201ENST00000530657 1135 ntBASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 AC069544.1-201ENST00000609399 999 ntBASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.29■□□□□ 0.52
TUBB1Q9H4B7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 Z85996.1-201ENST00000494644 937 ntBASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 AC004264.1-201ENST00000608354 794 ntBASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 NOC2LP1-202ENST00000452600 2235 ntBASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 LETM1P2-201ENST00000597330 2178 ntBASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TUBB1Q9H4B7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB1Q9H4B7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
TUBB1Q9H4B7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB1Q9H4B7 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.27■□□□□ 0.52
TUBB1Q9H4B7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB1Q9H4B7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB1Q9H4B7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB1Q9H4B7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB1Q9H4B7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.27■□□□□ 0.52
TUBB1Q9H4B7 HLA-L-209ENST00000420110 1011 ntBASIC18.27■□□□□ 0.52
TUBB1Q9H4B7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.27■□□□□ 0.52
TUBB1Q9H4B7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.27■□□□□ 0.52
TUBB1Q9H4B7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB1Q9H4B7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB1Q9H4B7 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.27■□□□□ 0.52
TUBB1Q9H4B7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.27■□□□□ 0.52
TUBB1Q9H4B7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB1Q9H4B7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
TUBB1Q9H4B7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB1Q9H4B7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB1Q9H4B7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB1Q9H4B7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
TUBB1Q9H4B7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TUBB1Q9H4B7 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TUBB1Q9H4B7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TUBB1Q9H4B7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.27■□□□□ 0.51
TUBB1Q9H4B7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.27■□□□□ 0.51
TUBB1Q9H4B7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TUBB1Q9H4B7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TUBB1Q9H4B7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TUBB1Q9H4B7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.27■□□□□ 0.51
TUBB1Q9H4B7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TUBB1Q9H4B7 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms