Protein–RNA interactions for Protein: Q9H2X0

CHRD, Chordin, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDQ9H2X0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRDQ9H2X0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHRDQ9H2X0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
CHRDQ9H2X0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CHRDQ9H2X0 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHRDQ9H2X0 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.01■□□□□ 0.63
CHRDQ9H2X0 GABARAPL3-202ENST00000624044 1851 ntBASIC19.01■□□□□ 0.63
CHRDQ9H2X0 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRDQ9H2X0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRDQ9H2X0 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CHRDQ9H2X0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.01■□□□□ 0.63
CHRDQ9H2X0 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHRDQ9H2X0 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.01■□□□□ 0.63
CHRDQ9H2X0 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRDQ9H2X0 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHRDQ9H2X0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CHRDQ9H2X0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CHRDQ9H2X0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CHRDQ9H2X0 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.01■□□□□ 0.63
CHRDQ9H2X0 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.01■□□□□ 0.63
CHRDQ9H2X0 AC104819.1-201ENST00000504587 486 ntBASIC19.01■□□□□ 0.63
CHRDQ9H2X0 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.01■□□□□ 0.63
CHRDQ9H2X0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.01■□□□□ 0.63
CHRDQ9H2X0 AL121912.1-201ENST00000603683 238 ntBASIC19.01■□□□□ 0.63
CHRDQ9H2X0 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.01■□□□□ 0.63
CHRDQ9H2X0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRDQ9H2X0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.01■□□□□ 0.63
CHRDQ9H2X0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.01■□□□□ 0.63
CHRDQ9H2X0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.01■□□□□ 0.63
CHRDQ9H2X0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRDQ9H2X0 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.01■□□□□ 0.63
CHRDQ9H2X0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CHRDQ9H2X0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CHRDQ9H2X0 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHRDQ9H2X0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19■□□□□ 0.63
CHRDQ9H2X0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CHRDQ9H2X0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHRDQ9H2X0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
CHRDQ9H2X0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CHRDQ9H2X0 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHRDQ9H2X0 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19■□□□□ 0.63
CHRDQ9H2X0 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
CHRDQ9H2X0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CHRDQ9H2X0 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19■□□□□ 0.63
CHRDQ9H2X0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHRDQ9H2X0 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19■□□□□ 0.63
CHRDQ9H2X0 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19■□□□□ 0.63
CHRDQ9H2X0 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CHRDQ9H2X0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19■□□□□ 0.63
CHRDQ9H2X0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHRDQ9H2X0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHRDQ9H2X0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19■□□□□ 0.63
CHRDQ9H2X0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CHRDQ9H2X0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19■□□□□ 0.63
CHRDQ9H2X0 KRT8P3-201ENST00000519669 1449 ntBASIC19■□□□□ 0.63
CHRDQ9H2X0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.99■□□□□ 0.63
CHRDQ9H2X0 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHRDQ9H2X0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHRDQ9H2X0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHRDQ9H2X0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHRDQ9H2X0 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.99■□□□□ 0.63
CHRDQ9H2X0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.99■□□□□ 0.63
CHRDQ9H2X0 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHRDQ9H2X0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHRDQ9H2X0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHRDQ9H2X0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHRDQ9H2X0 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CHRDQ9H2X0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.99■□□□□ 0.63
CHRDQ9H2X0 AC079776.4-201ENST00000511039 504 ntBASIC18.99■□□□□ 0.63
CHRDQ9H2X0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.99■□□□□ 0.63
CHRDQ9H2X0 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
CHRDQ9H2X0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.99■□□□□ 0.63
CHRDQ9H2X0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.99■□□□□ 0.63
CHRDQ9H2X0 AC090616.6-201ENST00000582640 721 ntBASIC18.99■□□□□ 0.63
CHRDQ9H2X0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHRDQ9H2X0 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.99■□□□□ 0.63
CHRDQ9H2X0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHRDQ9H2X0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.99■□□□□ 0.63
CHRDQ9H2X0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHRDQ9H2X0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.99■□□□□ 0.63
CHRDQ9H2X0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CHRDQ9H2X0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CHRDQ9H2X0 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.99■□□□□ 0.63
CHRDQ9H2X0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.98■□□□□ 0.63
CHRDQ9H2X0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHRDQ9H2X0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CHRDQ9H2X0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CHRDQ9H2X0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
CHRDQ9H2X0 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.98■□□□□ 0.63
CHRDQ9H2X0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHRDQ9H2X0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.98■□□□□ 0.63
CHRDQ9H2X0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CHRDQ9H2X0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHRDQ9H2X0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHRDQ9H2X0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHRDQ9H2X0 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHRDQ9H2X0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHRDQ9H2X0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHRDQ9H2X0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CHRDQ9H2X0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms