Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF38Q9H0F5 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.66■□□□□ 0.74
RNF38Q9H0F5 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF38Q9H0F5 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF38Q9H0F5 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF38Q9H0F5 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.66■□□□□ 0.74
RNF38Q9H0F5 HOMER2P1-201ENST00000455653 964 ntBASIC19.66■□□□□ 0.74
RNF38Q9H0F5 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
RNF38Q9H0F5 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF38Q9H0F5 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF38Q9H0F5 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.66■□□□□ 0.74
RNF38Q9H0F5 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
RNF38Q9H0F5 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RNF38Q9H0F5 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RNF38Q9H0F5 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF38Q9H0F5 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF38Q9H0F5 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF38Q9H0F5 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF38Q9H0F5 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF38Q9H0F5 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF38Q9H0F5 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.65■□□□□ 0.74
RNF38Q9H0F5 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF38Q9H0F5 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF38Q9H0F5 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF38Q9H0F5 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF38Q9H0F5 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
RNF38Q9H0F5 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.65■□□□□ 0.74
RNF38Q9H0F5 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF38Q9H0F5 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.65■□□□□ 0.74
RNF38Q9H0F5 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF38Q9H0F5 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
RNF38Q9H0F5 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.65■□□□□ 0.74
RNF38Q9H0F5 AL358472.4-201ENST00000633140 710 ntBASIC19.65■□□□□ 0.74
RNF38Q9H0F5 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF38Q9H0F5 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RNF38Q9H0F5 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RNF38Q9H0F5 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.65■□□□□ 0.74
RNF38Q9H0F5 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
RNF38Q9H0F5 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RNF38Q9H0F5 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.64■□□□□ 0.74
RNF38Q9H0F5 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
RNF38Q9H0F5 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
RNF38Q9H0F5 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.64■□□□□ 0.74
RNF38Q9H0F5 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF38Q9H0F5 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.64■□□□□ 0.73
RNF38Q9H0F5 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.64■□□□□ 0.73
RNF38Q9H0F5 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF38Q9H0F5 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.64■□□□□ 0.73
RNF38Q9H0F5 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
RNF38Q9H0F5 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF38Q9H0F5 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF38Q9H0F5 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
RNF38Q9H0F5 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
RNF38Q9H0F5 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF38Q9H0F5 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF38Q9H0F5 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF38Q9H0F5 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF38Q9H0F5 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.64■□□□□ 0.73
RNF38Q9H0F5 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
RNF38Q9H0F5 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.64■□□□□ 0.73
RNF38Q9H0F5 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF38Q9H0F5 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF38Q9H0F5 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF38Q9H0F5 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF38Q9H0F5 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF38Q9H0F5 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF38Q9H0F5 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF38Q9H0F5 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF38Q9H0F5 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF38Q9H0F5 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF38Q9H0F5 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.63■□□□□ 0.73
RNF38Q9H0F5 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.63■□□□□ 0.73
RNF38Q9H0F5 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF38Q9H0F5 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF38Q9H0F5 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RNF38Q9H0F5 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
RNF38Q9H0F5 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF38Q9H0F5 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
RNF38Q9H0F5 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
RNF38Q9H0F5 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF38Q9H0F5 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.63■□□□□ 0.73
RNF38Q9H0F5 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF38Q9H0F5 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF38Q9H0F5 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RNF38Q9H0F5 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF38Q9H0F5 FEM1AP3-201ENST00000403722 1741 ntBASIC19.62■□□□□ 0.73
RNF38Q9H0F5 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF38Q9H0F5 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF38Q9H0F5 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.62■□□□□ 0.73
RNF38Q9H0F5 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF38Q9H0F5 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF38Q9H0F5 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF38Q9H0F5 AP000523.1-201ENST00000398242 1049 ntBASIC19.62■□□□□ 0.73
RNF38Q9H0F5 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RNF38Q9H0F5 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.62■□□□□ 0.73
RNF38Q9H0F5 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RNF38Q9H0F5 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF38Q9H0F5 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF38Q9H0F5 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.62■□□□□ 0.73
RNF38Q9H0F5 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms