Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.24■□□□□ 0.67
PHACTR1Q9C0D0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHACTR1Q9C0D0 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.24■□□□□ 0.67
PHACTR1Q9C0D0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHACTR1Q9C0D0 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PHACTR1Q9C0D0 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHACTR1Q9C0D0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHACTR1Q9C0D0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.24■□□□□ 0.67
PHACTR1Q9C0D0 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PHACTR1Q9C0D0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PHACTR1Q9C0D0 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.24■□□□□ 0.67
PHACTR1Q9C0D0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHACTR1Q9C0D0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PHACTR1Q9C0D0 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.24■□□□□ 0.67
PHACTR1Q9C0D0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PHACTR1Q9C0D0 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
PHACTR1Q9C0D0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHACTR1Q9C0D0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.24■□□□□ 0.67
PHACTR1Q9C0D0 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
PHACTR1Q9C0D0 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PHACTR1Q9C0D0 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHACTR1Q9C0D0 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.24■□□□□ 0.67
PHACTR1Q9C0D0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PHACTR1Q9C0D0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PHACTR1Q9C0D0 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHACTR1Q9C0D0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PHACTR1Q9C0D0 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.24■□□□□ 0.67
PHACTR1Q9C0D0 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PHACTR1Q9C0D0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PHACTR1Q9C0D0 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.24■□□□□ 0.67
PHACTR1Q9C0D0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
PHACTR1Q9C0D0 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.23■□□□□ 0.67
PHACTR1Q9C0D0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.23■□□□□ 0.67
PHACTR1Q9C0D0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.23■□□□□ 0.67
PHACTR1Q9C0D0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PHACTR1Q9C0D0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.23■□□□□ 0.67
PHACTR1Q9C0D0 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHACTR1Q9C0D0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PHACTR1Q9C0D0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHACTR1Q9C0D0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.23■□□□□ 0.67
PHACTR1Q9C0D0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHACTR1Q9C0D0 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHACTR1Q9C0D0 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHACTR1Q9C0D0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.23■□□□□ 0.67
PHACTR1Q9C0D0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PHACTR1Q9C0D0 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.23■□□□□ 0.67
PHACTR1Q9C0D0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.23■□□□□ 0.67
PHACTR1Q9C0D0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.23■□□□□ 0.67
PHACTR1Q9C0D0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.23■□□□□ 0.67
PHACTR1Q9C0D0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
PHACTR1Q9C0D0 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PHACTR1Q9C0D0 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHACTR1Q9C0D0 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHACTR1Q9C0D0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.23■□□□□ 0.67
PHACTR1Q9C0D0 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PHACTR1Q9C0D0 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHACTR1Q9C0D0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PHACTR1Q9C0D0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
PHACTR1Q9C0D0 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHACTR1Q9C0D0 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHACTR1Q9C0D0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PHACTR1Q9C0D0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PHACTR1Q9C0D0 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PHACTR1Q9C0D0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PHACTR1Q9C0D0 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PHACTR1Q9C0D0 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PHACTR1Q9C0D0 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PHACTR1Q9C0D0 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PHACTR1Q9C0D0 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
PHACTR1Q9C0D0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
PHACTR1Q9C0D0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.22■□□□□ 0.67
PHACTR1Q9C0D0 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PHACTR1Q9C0D0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.22■□□□□ 0.67
PHACTR1Q9C0D0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.22■□□□□ 0.67
PHACTR1Q9C0D0 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
PHACTR1Q9C0D0 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.22■□□□□ 0.67
PHACTR1Q9C0D0 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
PHACTR1Q9C0D0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PHACTR1Q9C0D0 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PHACTR1Q9C0D0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.22■□□□□ 0.67
PHACTR1Q9C0D0 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PHACTR1Q9C0D0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PHACTR1Q9C0D0 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHACTR1Q9C0D0 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHACTR1Q9C0D0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHACTR1Q9C0D0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.21■□□□□ 0.67
PHACTR1Q9C0D0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
PHACTR1Q9C0D0 AC138932.1-201ENST00000534164 6830 ntBASIC19.21■□□□□ 0.67
PHACTR1Q9C0D0 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.21■□□□□ 0.67
PHACTR1Q9C0D0 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHACTR1Q9C0D0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHACTR1Q9C0D0 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.21■□□□□ 0.67
PHACTR1Q9C0D0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.21■□□□□ 0.67
PHACTR1Q9C0D0 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHACTR1Q9C0D0 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHACTR1Q9C0D0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PHACTR1Q9C0D0 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHACTR1Q9C0D0 KRT8P41-201ENST00000533985 1514 ntBASIC19.2■□□□□ 0.66
PHACTR1Q9C0D0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHACTR1Q9C0D0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms