Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC13.27□□□□□ -0.29
VPS25Q9BRG1 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
VPS25Q9BRG1 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
VPS25Q9BRG1 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
VPS25Q9BRG1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
VPS25Q9BRG1 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
VPS25Q9BRG1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
VPS25Q9BRG1 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VPS25Q9BRG1 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VPS25Q9BRG1 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.26□□□□□ -0.29
VPS25Q9BRG1 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
VPS25Q9BRG1 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VPS25Q9BRG1 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.26□□□□□ -0.29
VPS25Q9BRG1 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
VPS25Q9BRG1 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.26□□□□□ -0.29
VPS25Q9BRG1 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
VPS25Q9BRG1 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
VPS25Q9BRG1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VPS25Q9BRG1 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC13.26□□□□□ -0.29
VPS25Q9BRG1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC13.26□□□□□ -0.29
VPS25Q9BRG1 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VPS25Q9BRG1 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VPS25Q9BRG1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC13.26□□□□□ -0.29
VPS25Q9BRG1 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VPS25Q9BRG1 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VPS25Q9BRG1 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC13.26□□□□□ -0.29
VPS25Q9BRG1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VPS25Q9BRG1 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC13.26□□□□□ -0.29
VPS25Q9BRG1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC13.26□□□□□ -0.29
VPS25Q9BRG1 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VPS25Q9BRG1 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VPS25Q9BRG1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
VPS25Q9BRG1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
VPS25Q9BRG1 AC073592.3-201ENST00000625118 1834 ntBASIC13.26□□□□□ -0.29
VPS25Q9BRG1 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.26□□□□□ -0.29
VPS25Q9BRG1 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VPS25Q9BRG1 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VPS25Q9BRG1 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VPS25Q9BRG1 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VPS25Q9BRG1 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.26□□□□□ -0.29
VPS25Q9BRG1 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
VPS25Q9BRG1 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.25□□□□□ -0.29
VPS25Q9BRG1 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VPS25Q9BRG1 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
VPS25Q9BRG1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
VPS25Q9BRG1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
VPS25Q9BRG1 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS25Q9BRG1 AC126763.1-201ENST00000552015 2118 ntBASIC13.25□□□□□ -0.29
VPS25Q9BRG1 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS25Q9BRG1 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
VPS25Q9BRG1 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS25Q9BRG1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS25Q9BRG1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC13.25□□□□□ -0.29
VPS25Q9BRG1 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VPS25Q9BRG1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VPS25Q9BRG1 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
VPS25Q9BRG1 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS25Q9BRG1 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS25Q9BRG1 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS25Q9BRG1 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VPS25Q9BRG1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC13.25□□□□□ -0.29
VPS25Q9BRG1 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.25□□□□□ -0.29
VPS25Q9BRG1 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS25Q9BRG1 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS25Q9BRG1 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS25Q9BRG1 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS25Q9BRG1 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS25Q9BRG1 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
VPS25Q9BRG1 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
VPS25Q9BRG1 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.25□□□□□ -0.29
VPS25Q9BRG1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 ESPNP-201ENST00000270691 2015 ntBASIC13.24□□□□□ -0.29
VPS25Q9BRG1 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 AC104564.3-201ENST00000582367 638 ntBASIC13.24□□□□□ -0.29
VPS25Q9BRG1 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
VPS25Q9BRG1 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms