Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VGLL1Q99990 AL121832.2-201ENST00000610979 668 ntBASIC14.38□□□□□ -0.11
VGLL1Q99990 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VGLL1Q99990 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VGLL1Q99990 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VGLL1Q99990 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VGLL1Q99990 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VGLL1Q99990 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC14.38□□□□□ -0.11
VGLL1Q99990 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
VGLL1Q99990 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VGLL1Q99990 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
VGLL1Q99990 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
VGLL1Q99990 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VGLL1Q99990 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VGLL1Q99990 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VGLL1Q99990 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
VGLL1Q99990 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC14.38□□□□□ -0.11
VGLL1Q99990 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC14.38□□□□□ -0.11
VGLL1Q99990 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VGLL1Q99990 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
VGLL1Q99990 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
VGLL1Q99990 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VGLL1Q99990 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
VGLL1Q99990 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC14.37□□□□□ -0.11
VGLL1Q99990 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VGLL1Q99990 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.37□□□□□ -0.11
VGLL1Q99990 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
VGLL1Q99990 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VGLL1Q99990 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC14.37□□□□□ -0.11
VGLL1Q99990 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VGLL1Q99990 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VGLL1Q99990 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VGLL1Q99990 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
VGLL1Q99990 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
VGLL1Q99990 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
VGLL1Q99990 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VGLL1Q99990 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.37□□□□□ -0.11
VGLL1Q99990 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VGLL1Q99990 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
VGLL1Q99990 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VGLL1Q99990 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VGLL1Q99990 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VGLL1Q99990 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC14.37□□□□□ -0.11
VGLL1Q99990 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
VGLL1Q99990 REXO2-208ENST00000539754 791 ntTSL 2 BASIC14.37□□□□□ -0.11
VGLL1Q99990 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC14.37□□□□□ -0.11
VGLL1Q99990 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC14.37□□□□□ -0.11
VGLL1Q99990 VPS53-216ENST00000574029 585 ntTSL 4 BASIC14.37□□□□□ -0.11
VGLL1Q99990 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VGLL1Q99990 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
VGLL1Q99990 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VGLL1Q99990 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VGLL1Q99990 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.37□□□□□ -0.11
VGLL1Q99990 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC14.37□□□□□ -0.11
VGLL1Q99990 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
VGLL1Q99990 FEM1AP3-201ENST00000403722 1741 ntBASIC14.37□□□□□ -0.11
VGLL1Q99990 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VGLL1Q99990 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VGLL1Q99990 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VGLL1Q99990 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VGLL1Q99990 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC14.37□□□□□ -0.11
VGLL1Q99990 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VGLL1Q99990 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VGLL1Q99990 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL1Q99990 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL1Q99990 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL1Q99990 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL1Q99990 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL1Q99990 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL1Q99990 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC14.36□□□□□ -0.11
VGLL1Q99990 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
VGLL1Q99990 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL1Q99990 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL1Q99990 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.36□□□□□ -0.11
VGLL1Q99990 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL1Q99990 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL1Q99990 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.36□□□□□ -0.11
VGLL1Q99990 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL1Q99990 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
VGLL1Q99990 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL1Q99990 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL1Q99990 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC14.36□□□□□ -0.11
VGLL1Q99990 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL1Q99990 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
VGLL1Q99990 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL1Q99990 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL1Q99990 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
VGLL1Q99990 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL1Q99990 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
VGLL1Q99990 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC14.36□□□□□ -0.11
VGLL1Q99990 AC006970.2-201ENST00000450065 779 ntBASIC14.36□□□□□ -0.11
VGLL1Q99990 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC14.36□□□□□ -0.11
VGLL1Q99990 KRT18P16-201ENST00000510337 1294 ntBASIC14.36□□□□□ -0.11
VGLL1Q99990 DLX3-202ENST00000512495 834 ntTSL 2 BASIC14.36□□□□□ -0.11
VGLL1Q99990 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC14.36□□□□□ -0.11
VGLL1Q99990 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
VGLL1Q99990 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC14.36□□□□□ -0.11
VGLL1Q99990 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VGLL1Q99990 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
VGLL1Q99990 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms