Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CITED4Q96RK1 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.23■□□□□ 0.19
CITED4Q96RK1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
CITED4Q96RK1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CITED4Q96RK1 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.23■□□□□ 0.19
CITED4Q96RK1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CITED4Q96RK1 MIR572-201ENST00000384983 95 ntBASIC16.23■□□□□ 0.19
CITED4Q96RK1 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.23■□□□□ 0.19
CITED4Q96RK1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.23■□□□□ 0.19
CITED4Q96RK1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CITED4Q96RK1 LINC00896-202ENST00000609602 2128 ntBASIC16.23■□□□□ 0.19
CITED4Q96RK1 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CITED4Q96RK1 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CITED4Q96RK1 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CITED4Q96RK1 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CITED4Q96RK1 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CITED4Q96RK1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.23■□□□□ 0.19
CITED4Q96RK1 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
CITED4Q96RK1 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CITED4Q96RK1 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CITED4Q96RK1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC16.23■□□□□ 0.19
CITED4Q96RK1 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CITED4Q96RK1 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CITED4Q96RK1 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CITED4Q96RK1 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CITED4Q96RK1 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CITED4Q96RK1 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
CITED4Q96RK1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CITED4Q96RK1 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CITED4Q96RK1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CITED4Q96RK1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CITED4Q96RK1 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CITED4Q96RK1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.22■□□□□ 0.19
CITED4Q96RK1 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.22■□□□□ 0.19
CITED4Q96RK1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CITED4Q96RK1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.22■□□□□ 0.19
CITED4Q96RK1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CITED4Q96RK1 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC16.22■□□□□ 0.19
CITED4Q96RK1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CITED4Q96RK1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CITED4Q96RK1 AL354811.1-201ENST00000610286 706 ntBASIC16.22■□□□□ 0.19
CITED4Q96RK1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CITED4Q96RK1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CITED4Q96RK1 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CITED4Q96RK1 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CITED4Q96RK1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CITED4Q96RK1 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.22■□□□□ 0.19
CITED4Q96RK1 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
CITED4Q96RK1 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.22■□□□□ 0.19
CITED4Q96RK1 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CITED4Q96RK1 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.22■□□□□ 0.19
CITED4Q96RK1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CITED4Q96RK1 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CITED4Q96RK1 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CITED4Q96RK1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CITED4Q96RK1 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CITED4Q96RK1 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CITED4Q96RK1 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CITED4Q96RK1 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.21■□□□□ 0.19
CITED4Q96RK1 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.21■□□□□ 0.19
CITED4Q96RK1 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CITED4Q96RK1 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CITED4Q96RK1 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CITED4Q96RK1 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.21■□□□□ 0.19
CITED4Q96RK1 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC16.21■□□□□ 0.19
CITED4Q96RK1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CITED4Q96RK1 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CITED4Q96RK1 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CITED4Q96RK1 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CITED4Q96RK1 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.21■□□□□ 0.19
CITED4Q96RK1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CITED4Q96RK1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CITED4Q96RK1 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CITED4Q96RK1 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CITED4Q96RK1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CITED4Q96RK1 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
CITED4Q96RK1 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.21■□□□□ 0.19
CITED4Q96RK1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC16.21■□□□□ 0.19
CITED4Q96RK1 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC16.21■□□□□ 0.19
CITED4Q96RK1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CITED4Q96RK1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC16.21■□□□□ 0.19
CITED4Q96RK1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC16.21■□□□□ 0.19
CITED4Q96RK1 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC16.21■□□□□ 0.19
CITED4Q96RK1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC16.21■□□□□ 0.19
CITED4Q96RK1 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
CITED4Q96RK1 AC006333.2-201ENST00000607957 2099 ntBASIC16.21■□□□□ 0.19
CITED4Q96RK1 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CITED4Q96RK1 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CITED4Q96RK1 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CITED4Q96RK1 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CITED4Q96RK1 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CITED4Q96RK1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CITED4Q96RK1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CITED4Q96RK1 ESPNP-201ENST00000270691 2015 ntBASIC16.21■□□□□ 0.18
CITED4Q96RK1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.18
CITED4Q96RK1 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CITED4Q96RK1 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
CITED4Q96RK1 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CITED4Q96RK1 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CITED4Q96RK1 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms