Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.58■□□□□ 0.72
PRICKLE1Q96MT3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PRICKLE1Q96MT3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.58■□□□□ 0.72
PRICKLE1Q96MT3 AC010653.2-201ENST00000623505 997 ntBASIC19.58■□□□□ 0.72
PRICKLE1Q96MT3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.58■□□□□ 0.72
PRICKLE1Q96MT3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
PRICKLE1Q96MT3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRICKLE1Q96MT3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PRICKLE1Q96MT3 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PRICKLE1Q96MT3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.58■□□□□ 0.72
PRICKLE1Q96MT3 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRICKLE1Q96MT3 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRICKLE1Q96MT3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.58■□□□□ 0.72
PRICKLE1Q96MT3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PRICKLE1Q96MT3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.58■□□□□ 0.72
PRICKLE1Q96MT3 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 MIR4674-201ENST00000582457 87 ntBASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PRICKLE1Q96MT3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRICKLE1Q96MT3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRICKLE1Q96MT3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.56■□□□□ 0.72
PRICKLE1Q96MT3 AL032819.2-201ENST00000624543 2162 ntBASIC19.56■□□□□ 0.72
PRICKLE1Q96MT3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
PRICKLE1Q96MT3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRICKLE1Q96MT3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRICKLE1Q96MT3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRICKLE1Q96MT3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRICKLE1Q96MT3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRICKLE1Q96MT3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
PRICKLE1Q96MT3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.56■□□□□ 0.72
PRICKLE1Q96MT3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRICKLE1Q96MT3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PRICKLE1Q96MT3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRICKLE1Q96MT3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRICKLE1Q96MT3 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
PRICKLE1Q96MT3 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.56■□□□□ 0.72
PRICKLE1Q96MT3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRICKLE1Q96MT3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRICKLE1Q96MT3 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRICKLE1Q96MT3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.55■□□□□ 0.72
PRICKLE1Q96MT3 AC141586.3-201ENST00000562166 1838 ntBASIC19.55■□□□□ 0.72
PRICKLE1Q96MT3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
PRICKLE1Q96MT3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRICKLE1Q96MT3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRICKLE1Q96MT3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.55■□□□□ 0.72
PRICKLE1Q96MT3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRICKLE1Q96MT3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.55■□□□□ 0.72
PRICKLE1Q96MT3 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRICKLE1Q96MT3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRICKLE1Q96MT3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRICKLE1Q96MT3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
PRICKLE1Q96MT3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.55■□□□□ 0.72
PRICKLE1Q96MT3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.55■□□□□ 0.72
PRICKLE1Q96MT3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.55■□□□□ 0.72
PRICKLE1Q96MT3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.55■□□□□ 0.72
PRICKLE1Q96MT3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PRICKLE1Q96MT3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.55■□□□□ 0.72
PRICKLE1Q96MT3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.55■□□□□ 0.72
PRICKLE1Q96MT3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.55■□□□□ 0.72
PRICKLE1Q96MT3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.55■□□□□ 0.72
PRICKLE1Q96MT3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRICKLE1Q96MT3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PRICKLE1Q96MT3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.55■□□□□ 0.72
PRICKLE1Q96MT3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRICKLE1Q96MT3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRICKLE1Q96MT3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PRICKLE1Q96MT3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.55■□□□□ 0.72
PRICKLE1Q96MT3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms