Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 MESTP1-201ENST00000404287 994 ntBASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 WIZP1-201ENST00000531444 2299 ntBASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 RCC2P6-201ENST00000526625 1557 ntBASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
HMGCLL1Q8TB92 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCLL1Q8TB92 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.62■□□□□ 0.57
HMGCLL1Q8TB92 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.62■□□□□ 0.57
HMGCLL1Q8TB92 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
HMGCLL1Q8TB92 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.62■□□□□ 0.57
HMGCLL1Q8TB92 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCLL1Q8TB92 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCLL1Q8TB92 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCLL1Q8TB92 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.62■□□□□ 0.57
HMGCLL1Q8TB92 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCLL1Q8TB92 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCLL1Q8TB92 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCLL1Q8TB92 AL355355.2-201ENST00000442321 338 ntBASIC18.62■□□□□ 0.57
HMGCLL1Q8TB92 SNORA78-201ENST00000459373 127 ntBASIC18.62■□□□□ 0.57
HMGCLL1Q8TB92 B3GAT3P1-201ENST00000471720 806 ntBASIC18.62■□□□□ 0.57
HMGCLL1Q8TB92 MIR6786-201ENST00000616843 113 ntBASIC18.62■□□□□ 0.57
HMGCLL1Q8TB92 AC130371.2-201ENST00000619443 611 ntBASIC18.62■□□□□ 0.57
HMGCLL1Q8TB92 KRT17P2-201ENST00000300992 1314 ntBASIC18.62■□□□□ 0.57
HMGCLL1Q8TB92 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.62■□□□□ 0.57
HMGCLL1Q8TB92 AC093525.10-201ENST00000625130 1569 ntBASIC18.62■□□□□ 0.57
HMGCLL1Q8TB92 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.62■□□□□ 0.57
HMGCLL1Q8TB92 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HMGCLL1Q8TB92 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.62■□□□□ 0.57
HMGCLL1Q8TB92 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCLL1Q8TB92 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCLL1Q8TB92 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCLL1Q8TB92 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.62■□□□□ 0.57
HMGCLL1Q8TB92 SDHAP1-207ENST00000440850 2000 ntBASIC18.62■□□□□ 0.57
HMGCLL1Q8TB92 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
HMGCLL1Q8TB92 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.62■□□□□ 0.57
HMGCLL1Q8TB92 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
HMGCLL1Q8TB92 AC135050.7-201ENST00000624508 2218 ntBASIC18.62■□□□□ 0.57
HMGCLL1Q8TB92 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.62■□□□□ 0.57
HMGCLL1Q8TB92 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
HMGCLL1Q8TB92 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.61■□□□□ 0.57
HMGCLL1Q8TB92 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCLL1Q8TB92 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.61■□□□□ 0.57
HMGCLL1Q8TB92 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
HMGCLL1Q8TB92 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCLL1Q8TB92 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCLL1Q8TB92 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCLL1Q8TB92 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCLL1Q8TB92 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCLL1Q8TB92 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCLL1Q8TB92 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
HMGCLL1Q8TB92 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCLL1Q8TB92 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.61■□□□□ 0.57
HMGCLL1Q8TB92 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.61■□□□□ 0.57
HMGCLL1Q8TB92 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HMGCLL1Q8TB92 AC004951.3-201ENST00000418645 1148 ntBASIC18.61■□□□□ 0.57
HMGCLL1Q8TB92 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCLL1Q8TB92 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCLL1Q8TB92 TSPY7P-201ENST00000431358 1114 ntBASIC18.61■□□□□ 0.57
HMGCLL1Q8TB92 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCLL1Q8TB92 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.61■□□□□ 0.57
HMGCLL1Q8TB92 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.61■□□□□ 0.57
HMGCLL1Q8TB92 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.61■□□□□ 0.57
HMGCLL1Q8TB92 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.61■□□□□ 0.57
HMGCLL1Q8TB92 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.61■□□□□ 0.57
HMGCLL1Q8TB92 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.61■□□□□ 0.57
HMGCLL1Q8TB92 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCLL1Q8TB92 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCLL1Q8TB92 AC005332.8-201ENST00000622750 2735 ntBASIC18.61■□□□□ 0.57
HMGCLL1Q8TB92 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HMGCLL1Q8TB92 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.61■□□□□ 0.57
HMGCLL1Q8TB92 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.61■□□□□ 0.57
HMGCLL1Q8TB92 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.61■□□□□ 0.57
HMGCLL1Q8TB92 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.61■□□□□ 0.57
HMGCLL1Q8TB92 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.6■□□□□ 0.57
HMGCLL1Q8TB92 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.6■□□□□ 0.57
HMGCLL1Q8TB92 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.6■□□□□ 0.57
HMGCLL1Q8TB92 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
HMGCLL1Q8TB92 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCLL1Q8TB92 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCLL1Q8TB92 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCLL1Q8TB92 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCLL1Q8TB92 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HMGCLL1Q8TB92 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms