Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF169Q8NCN4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF169Q8NCN4 PCED1CP-201ENST00000419887 785 ntBASIC20.65■□□□□ 0.9
RNF169Q8NCN4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RNF169Q8NCN4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF169Q8NCN4 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF169Q8NCN4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.65■□□□□ 0.9
RNF169Q8NCN4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
RNF169Q8NCN4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF169Q8NCN4 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.65■□□□□ 0.9
RNF169Q8NCN4 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.65■□□□□ 0.9
RNF169Q8NCN4 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.65■□□□□ 0.9
RNF169Q8NCN4 AP000550.4-202ENST00000639755 178 ntBASIC20.65■□□□□ 0.9
RNF169Q8NCN4 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RNF169Q8NCN4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF169Q8NCN4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF169Q8NCN4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RNF169Q8NCN4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF169Q8NCN4 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF169Q8NCN4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RNF169Q8NCN4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RNF169Q8NCN4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.64■□□□□ 0.89
RNF169Q8NCN4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF169Q8NCN4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.64■□□□□ 0.89
RNF169Q8NCN4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF169Q8NCN4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RNF169Q8NCN4 AP000523.1-201ENST00000398242 1049 ntBASIC20.64■□□□□ 0.89
RNF169Q8NCN4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.64■□□□□ 0.89
RNF169Q8NCN4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF169Q8NCN4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF169Q8NCN4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RNF169Q8NCN4 GCSHP2-201ENST00000560971 527 ntBASIC20.64■□□□□ 0.89
RNF169Q8NCN4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.64■□□□□ 0.89
RNF169Q8NCN4 AC093458.2-201ENST00000623150 629 ntBASIC20.64■□□□□ 0.89
RNF169Q8NCN4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF169Q8NCN4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
RNF169Q8NCN4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.64■□□□□ 0.89
RNF169Q8NCN4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.64■□□□□ 0.89
RNF169Q8NCN4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.64■□□□□ 0.89
RNF169Q8NCN4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RNF169Q8NCN4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF169Q8NCN4 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.64■□□□□ 0.89
RNF169Q8NCN4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RNF169Q8NCN4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF169Q8NCN4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF169Q8NCN4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF169Q8NCN4 IER3-202ENST00000376377 1350 ntBASIC20.63■□□□□ 0.89
RNF169Q8NCN4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF169Q8NCN4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF169Q8NCN4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF169Q8NCN4 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF169Q8NCN4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.63■□□□□ 0.89
RNF169Q8NCN4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
RNF169Q8NCN4 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF169Q8NCN4 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF169Q8NCN4 FAM86EP-206ENST00000510506 987 ntBASIC20.63■□□□□ 0.89
RNF169Q8NCN4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
RNF169Q8NCN4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.63■□□□□ 0.89
RNF169Q8NCN4 AL121956.5-201ENST00000625261 221 ntBASIC20.63■□□□□ 0.89
RNF169Q8NCN4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RNF169Q8NCN4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.63■□□□□ 0.89
RNF169Q8NCN4 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.63■□□□□ 0.89
RNF169Q8NCN4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF169Q8NCN4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.63■□□□□ 0.89
RNF169Q8NCN4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF169Q8NCN4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RNF169Q8NCN4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF169Q8NCN4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
RNF169Q8NCN4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
RNF169Q8NCN4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF169Q8NCN4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.62■□□□□ 0.89
RNF169Q8NCN4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF169Q8NCN4 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF169Q8NCN4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.62■□□□□ 0.89
RNF169Q8NCN4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF169Q8NCN4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RNF169Q8NCN4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF169Q8NCN4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF169Q8NCN4 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF169Q8NCN4 TSPY21P-201ENST00000433481 731 ntBASIC20.62■□□□□ 0.89
RNF169Q8NCN4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.62■□□□□ 0.89
RNF169Q8NCN4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.62■□□□□ 0.89
RNF169Q8NCN4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
RNF169Q8NCN4 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.62■□□□□ 0.89
RNF169Q8NCN4 AC008622.2-201ENST00000617006 1229 ntBASIC20.62■□□□□ 0.89
RNF169Q8NCN4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RNF169Q8NCN4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RNF169Q8NCN4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.61■□□□□ 0.89
RNF169Q8NCN4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF169Q8NCN4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF169Q8NCN4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF169Q8NCN4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
RNF169Q8NCN4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF169Q8NCN4 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF169Q8NCN4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.61■□□□□ 0.89
RNF169Q8NCN4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF169Q8NCN4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF169Q8NCN4 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RNF169Q8NCN4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RNF169Q8NCN4 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms