Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 ID1-201ENST00000376105 1233 ntBASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 MIR663A-201ENST00000385250 93 ntBASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRIM42Q8IWZ5 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 GPX1P1-201ENST00000388829 606 ntBASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 AC005181.1-201ENST00000604782 1256 ntBASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 AC068880.1-201ENST00000507289 2297 ntBASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 KRT17P1-201ENST00000399211 1546 ntBASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM42Q8IWZ5 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.89■□□□□ 0.62
TRIM42Q8IWZ5 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
TRIM42Q8IWZ5 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRIM42Q8IWZ5 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM42Q8IWZ5 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TRIM42Q8IWZ5 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM42Q8IWZ5 AC073210.2-201ENST00000430369 194 ntBASIC18.89■□□□□ 0.61
TRIM42Q8IWZ5 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM42Q8IWZ5 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TRIM42Q8IWZ5 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM42Q8IWZ5 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.89■□□□□ 0.61
TRIM42Q8IWZ5 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM42Q8IWZ5 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM42Q8IWZ5 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM42Q8IWZ5 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM42Q8IWZ5 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
TRIM42Q8IWZ5 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM42Q8IWZ5 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM42Q8IWZ5 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM42Q8IWZ5 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TRIM42Q8IWZ5 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.89■□□□□ 0.61
TRIM42Q8IWZ5 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TRIM42Q8IWZ5 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM42Q8IWZ5 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.89■□□□□ 0.61
TRIM42Q8IWZ5 AL162741.1-201ENST00000565563 1558 ntBASIC18.89■□□□□ 0.61
TRIM42Q8IWZ5 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM42Q8IWZ5 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms