Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CDKL3Q8IVW4 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.5■□□□□ 0.71
CDKL3Q8IVW4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CDKL3Q8IVW4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDKL3Q8IVW4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDKL3Q8IVW4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDKL3Q8IVW4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDKL3Q8IVW4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDKL3Q8IVW4 KSR1P1-201ENST00000446298 240 ntBASIC19.49■□□□□ 0.71
CDKL3Q8IVW4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDKL3Q8IVW4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.49■□□□□ 0.71
CDKL3Q8IVW4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.49■□□□□ 0.71
CDKL3Q8IVW4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDKL3Q8IVW4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.49■□□□□ 0.71
CDKL3Q8IVW4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CDKL3Q8IVW4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CDKL3Q8IVW4 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CDKL3Q8IVW4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.49■□□□□ 0.71
CDKL3Q8IVW4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDKL3Q8IVW4 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDKL3Q8IVW4 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CDKL3Q8IVW4 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDKL3Q8IVW4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CDKL3Q8IVW4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDKL3Q8IVW4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDKL3Q8IVW4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDKL3Q8IVW4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.48■□□□□ 0.71
CDKL3Q8IVW4 RPS2P4-201ENST00000476944 856 ntBASIC19.48■□□□□ 0.71
CDKL3Q8IVW4 RPPH1-201ENST00000516869 333 ntBASIC19.48■□□□□ 0.71
CDKL3Q8IVW4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.48■□□□□ 0.71
CDKL3Q8IVW4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.48■□□□□ 0.71
CDKL3Q8IVW4 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDKL3Q8IVW4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDKL3Q8IVW4 KRT8P11-201ENST00000409686 1436 ntBASIC19.48■□□□□ 0.71
CDKL3Q8IVW4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.48■□□□□ 0.71
CDKL3Q8IVW4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.48■□□□□ 0.71
CDKL3Q8IVW4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDKL3Q8IVW4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CDKL3Q8IVW4 AC020763.4-201ENST00000623414 4170 ntBASIC19.47■□□□□ 0.71
CDKL3Q8IVW4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDKL3Q8IVW4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDKL3Q8IVW4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDKL3Q8IVW4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDKL3Q8IVW4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CDKL3Q8IVW4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.47■□□□□ 0.71
CDKL3Q8IVW4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.47■□□□□ 0.71
CDKL3Q8IVW4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDKL3Q8IVW4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CDKL3Q8IVW4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.47■□□□□ 0.71
CDKL3Q8IVW4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.47■□□□□ 0.71
CDKL3Q8IVW4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CDKL3Q8IVW4 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.47■□□□□ 0.71
CDKL3Q8IVW4 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CDKL3Q8IVW4 PRSS44-201ENST00000515154 1146 ntBASIC19.47■□□□□ 0.71
CDKL3Q8IVW4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.47■□□□□ 0.71
CDKL3Q8IVW4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.47■□□□□ 0.71
CDKL3Q8IVW4 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDKL3Q8IVW4 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDKL3Q8IVW4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CDKL3Q8IVW4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.47■□□□□ 0.71
CDKL3Q8IVW4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDKL3Q8IVW4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDKL3Q8IVW4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CDKL3Q8IVW4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CDKL3Q8IVW4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.47■□□□□ 0.71
CDKL3Q8IVW4 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.47■□□□□ 0.71
CDKL3Q8IVW4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDKL3Q8IVW4 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDKL3Q8IVW4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.46■□□□□ 0.71
CDKL3Q8IVW4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDKL3Q8IVW4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDKL3Q8IVW4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKL3Q8IVW4 KRT16P1-201ENST00000399124 1418 ntBASIC19.46■□□□□ 0.71
CDKL3Q8IVW4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKL3Q8IVW4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDKL3Q8IVW4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKL3Q8IVW4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKL3Q8IVW4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKL3Q8IVW4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDKL3Q8IVW4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDKL3Q8IVW4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CDKL3Q8IVW4 FAM201B-201ENST00000458407 597 ntBASIC19.46■□□□□ 0.71
CDKL3Q8IVW4 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.46■□□□□ 0.71
CDKL3Q8IVW4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CDKL3Q8IVW4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKL3Q8IVW4 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKL3Q8IVW4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CDKL3Q8IVW4 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.46■□□□□ 0.71
CDKL3Q8IVW4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.46■□□□□ 0.71
CDKL3Q8IVW4 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDKL3Q8IVW4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDKL3Q8IVW4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.45■□□□□ 0.7
CDKL3Q8IVW4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.45■□□□□ 0.7
CDKL3Q8IVW4 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDKL3Q8IVW4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDKL3Q8IVW4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDKL3Q8IVW4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDKL3Q8IVW4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.45■□□□□ 0.7
CDKL3Q8IVW4 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CDKL3Q8IVW4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms