Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LRRTM1Q86UE6 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM1Q86UE6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM1Q86UE6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LRRTM1Q86UE6 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM1Q86UE6 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM1Q86UE6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM1Q86UE6 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM1Q86UE6 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM1Q86UE6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRTM1Q86UE6 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM1Q86UE6 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.47■□□□□ 0.23
LRRTM1Q86UE6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM1Q86UE6 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM1Q86UE6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRTM1Q86UE6 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.47■□□□□ 0.23
LRRTM1Q86UE6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.47■□□□□ 0.23
LRRTM1Q86UE6 AC105036.2-201ENST00000569468 176 ntBASIC16.47■□□□□ 0.23
LRRTM1Q86UE6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRTM1Q86UE6 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM1Q86UE6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM1Q86UE6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM1Q86UE6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM1Q86UE6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRTM1Q86UE6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRTM1Q86UE6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.47■□□□□ 0.23
LRRTM1Q86UE6 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM1Q86UE6 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LRRTM1Q86UE6 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRTM1Q86UE6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRRTM1Q86UE6 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRTM1Q86UE6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRTM1Q86UE6 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRRTM1Q86UE6 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRRTM1Q86UE6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRTM1Q86UE6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRTM1Q86UE6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
LRRTM1Q86UE6 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRTM1Q86UE6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.46■□□□□ 0.23
LRRTM1Q86UE6 TUBB8P6-201ENST00000436895 1288 ntBASIC16.46■□□□□ 0.23
LRRTM1Q86UE6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC16.46■□□□□ 0.23
LRRTM1Q86UE6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.46■□□□□ 0.23
LRRTM1Q86UE6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.46■□□□□ 0.23
LRRTM1Q86UE6 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.46■□□□□ 0.23
LRRTM1Q86UE6 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.46■□□□□ 0.23
LRRTM1Q86UE6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRTM1Q86UE6 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRTM1Q86UE6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRTM1Q86UE6 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
LRRTM1Q86UE6 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRTM1Q86UE6 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRTM1Q86UE6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LRRTM1Q86UE6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LRRTM1Q86UE6 AC067852.2-201ENST00000590513 2313 ntBASIC16.46■□□□□ 0.23
LRRTM1Q86UE6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
LRRTM1Q86UE6 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LRRTM1Q86UE6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LRRTM1Q86UE6 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
LRRTM1Q86UE6 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRTM1Q86UE6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
LRRTM1Q86UE6 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.45■□□□□ 0.22
LRRTM1Q86UE6 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRTM1Q86UE6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRTM1Q86UE6 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRTM1Q86UE6 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRTM1Q86UE6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRRTM1Q86UE6 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.45■□□□□ 0.22
LRRTM1Q86UE6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRTM1Q86UE6 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LRRTM1Q86UE6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.45■□□□□ 0.22
LRRTM1Q86UE6 AF201337.1-201ENST00000520239 748 ntBASIC16.45■□□□□ 0.22
LRRTM1Q86UE6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.45■□□□□ 0.22
LRRTM1Q86UE6 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.45■□□□□ 0.22
LRRTM1Q86UE6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.45■□□□□ 0.22
LRRTM1Q86UE6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LRRTM1Q86UE6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LRRTM1Q86UE6 AL050303.2-201ENST00000619798 666 ntBASIC16.45■□□□□ 0.22
LRRTM1Q86UE6 AL162741.1-201ENST00000565563 1558 ntBASIC16.45■□□□□ 0.22
LRRTM1Q86UE6 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.45■□□□□ 0.22
LRRTM1Q86UE6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRTM1Q86UE6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRTM1Q86UE6 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRTM1Q86UE6 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRTM1Q86UE6 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRTM1Q86UE6 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LRRTM1Q86UE6 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.44■□□□□ 0.22
LRRTM1Q86UE6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms