Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM53Q6P2H8 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 RPS2P52-201ENST00000469610 820 ntBASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 UNC93B4-201ENST00000505679 747 ntBASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 AC008687.6-201ENST00000596318 630 ntBASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 PHGDH-210ENST00000641115 1638 ntBASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.34■□□□□ 0.37
TMEM53Q6P2H8 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.33■□□□□ 0.37
TMEM53Q6P2H8 AC009113.1-201ENST00000570267 2443 ntBASIC17.33■□□□□ 0.37
TMEM53Q6P2H8 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.33■□□□□ 0.37
TMEM53Q6P2H8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM53Q6P2H8 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM53Q6P2H8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.33■□□□□ 0.37
TMEM53Q6P2H8 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM53Q6P2H8 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM53Q6P2H8 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.33■□□□□ 0.37
TMEM53Q6P2H8 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM53Q6P2H8 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
TMEM53Q6P2H8 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TMEM53Q6P2H8 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TMEM53Q6P2H8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM53Q6P2H8 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM53Q6P2H8 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM53Q6P2H8 CD99P1-205ENST00000527459 561 ntBASIC17.33■□□□□ 0.36
TMEM53Q6P2H8 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.33■□□□□ 0.36
TMEM53Q6P2H8 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.33■□□□□ 0.36
TMEM53Q6P2H8 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.33■□□□□ 0.36
TMEM53Q6P2H8 AC120498.8-201ENST00000614275 531 ntBASIC17.33■□□□□ 0.36
TMEM53Q6P2H8 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.33■□□□□ 0.36
TMEM53Q6P2H8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TMEM53Q6P2H8 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.33■□□□□ 0.36
TMEM53Q6P2H8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM53Q6P2H8 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TMEM53Q6P2H8 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM53Q6P2H8 TCF3P1-201ENST00000423021 1937 ntBASIC17.33■□□□□ 0.36
TMEM53Q6P2H8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM53Q6P2H8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
TMEM53Q6P2H8 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TMEM53Q6P2H8 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM53Q6P2H8 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM53Q6P2H8 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TMEM53Q6P2H8 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 AL596257.1-201ENST00000641463 2694 ntBASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.32■□□□□ 0.36
TMEM53Q6P2H8 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms