Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDKAL1Q5VV42 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.78■□□□□ 0.92
CDKAL1Q5VV42 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.78■□□□□ 0.92
CDKAL1Q5VV42 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDKAL1Q5VV42 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDKAL1Q5VV42 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.78■□□□□ 0.92
CDKAL1Q5VV42 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDKAL1Q5VV42 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDKAL1Q5VV42 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CDKAL1Q5VV42 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.78■□□□□ 0.92
CDKAL1Q5VV42 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDKAL1Q5VV42 AP003097.1-201ENST00000530657 1135 ntBASIC20.78■□□□□ 0.92
CDKAL1Q5VV42 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.78■□□□□ 0.92
CDKAL1Q5VV42 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.78■□□□□ 0.92
CDKAL1Q5VV42 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.78■□□□□ 0.92
CDKAL1Q5VV42 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC20.78■□□□□ 0.92
CDKAL1Q5VV42 AC068587.9-201ENST00000641814 219 ntBASIC20.78■□□□□ 0.92
CDKAL1Q5VV42 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CDKAL1Q5VV42 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.78■□□□□ 0.92
CDKAL1Q5VV42 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDKAL1Q5VV42 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDKAL1Q5VV42 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDKAL1Q5VV42 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.78■□□□□ 0.92
CDKAL1Q5VV42 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.77■□□□□ 0.92
CDKAL1Q5VV42 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDKAL1Q5VV42 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDKAL1Q5VV42 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.77■□□□□ 0.92
CDKAL1Q5VV42 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.77■□□□□ 0.92
CDKAL1Q5VV42 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CDKAL1Q5VV42 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDKAL1Q5VV42 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDKAL1Q5VV42 ABALON-201ENST00000629058 1903 ntBASIC20.77■□□□□ 0.92
CDKAL1Q5VV42 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDKAL1Q5VV42 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDKAL1Q5VV42 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
CDKAL1Q5VV42 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDKAL1Q5VV42 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDKAL1Q5VV42 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDKAL1Q5VV42 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.77■□□□□ 0.92
CDKAL1Q5VV42 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.77■□□□□ 0.92
CDKAL1Q5VV42 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
CDKAL1Q5VV42 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDKAL1Q5VV42 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CDKAL1Q5VV42 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.77■□□□□ 0.92
CDKAL1Q5VV42 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.77■□□□□ 0.92
CDKAL1Q5VV42 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.77■□□□□ 0.92
CDKAL1Q5VV42 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDKAL1Q5VV42 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.77■□□□□ 0.92
CDKAL1Q5VV42 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC20.77■□□□□ 0.92
CDKAL1Q5VV42 AC018470.1-201ENST00000624790 3129 ntBASIC20.77■□□□□ 0.92
CDKAL1Q5VV42 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDKAL1Q5VV42 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDKAL1Q5VV42 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CDKAL1Q5VV42 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.77■□□□□ 0.91
CDKAL1Q5VV42 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CDKAL1Q5VV42 AL499627.1-201ENST00000569373 2188 ntBASIC20.76■□□□□ 0.91
CDKAL1Q5VV42 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDKAL1Q5VV42 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDKAL1Q5VV42 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
CDKAL1Q5VV42 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDKAL1Q5VV42 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.76■□□□□ 0.91
CDKAL1Q5VV42 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDKAL1Q5VV42 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CDKAL1Q5VV42 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.76■□□□□ 0.91
CDKAL1Q5VV42 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.76■□□□□ 0.91
CDKAL1Q5VV42 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.76■□□□□ 0.91
CDKAL1Q5VV42 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.76■□□□□ 0.91
CDKAL1Q5VV42 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.76■□□□□ 0.91
CDKAL1Q5VV42 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDKAL1Q5VV42 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDKAL1Q5VV42 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDKAL1Q5VV42 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CDKAL1Q5VV42 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.75■□□□□ 0.91
CDKAL1Q5VV42 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDKAL1Q5VV42 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.75■□□□□ 0.91
CDKAL1Q5VV42 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDKAL1Q5VV42 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDKAL1Q5VV42 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.75■□□□□ 0.91
CDKAL1Q5VV42 AC005332.8-201ENST00000622750 2735 ntBASIC20.75■□□□□ 0.91
CDKAL1Q5VV42 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDKAL1Q5VV42 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDKAL1Q5VV42 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDKAL1Q5VV42 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDKAL1Q5VV42 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CDKAL1Q5VV42 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CDKAL1Q5VV42 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.75■□□□□ 0.91
CDKAL1Q5VV42 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDKAL1Q5VV42 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDKAL1Q5VV42 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CDKAL1Q5VV42 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.75■□□□□ 0.91
CDKAL1Q5VV42 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDKAL1Q5VV42 KRT8P11-201ENST00000409686 1436 ntBASIC20.75■□□□□ 0.91
CDKAL1Q5VV42 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CDKAL1Q5VV42 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDKAL1Q5VV42 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDKAL1Q5VV42 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDKAL1Q5VV42 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDKAL1Q5VV42 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDKAL1Q5VV42 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDKAL1Q5VV42 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms