Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB5BP61020 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RAB5BP61020 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB5BP61020 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RAB5BP61020 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
RAB5BP61020 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB5BP61020 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB5BP61020 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
RAB5BP61020 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB5BP61020 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC14.89□□□□□ -0.03
RAB5BP61020 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB5BP61020 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB5BP61020 VGF-203ENST00000611537 1622 ntTSL 5 BASIC14.89□□□□□ -0.03
RAB5BP61020 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB5BP61020 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB5BP61020 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB5BP61020 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB5BP61020 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB5BP61020 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB5BP61020 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC14.89□□□□□ -0.03
RAB5BP61020 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
RAB5BP61020 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.89□□□□□ -0.03
RAB5BP61020 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB5BP61020 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB5BP61020 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB5BP61020 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB5BP61020 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
RAB5BP61020 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RAB5BP61020 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB5BP61020 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB5BP61020 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.89□□□□□ -0.03
RAB5BP61020 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB5BP61020 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
RAB5BP61020 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB5BP61020 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB5BP61020 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB5BP61020 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB5BP61020 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB5BP61020 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC14.89□□□□□ -0.03
RAB5BP61020 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RAB5BP61020 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RAB5BP61020 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
RAB5BP61020 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RAB5BP61020 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RAB5BP61020 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB5BP61020 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAB5BP61020 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB5BP61020 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB5BP61020 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAB5BP61020 BX005040.4-201ENST00000637145 1518 ntBASIC14.88□□□□□ -0.03
RAB5BP61020 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB5BP61020 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RAB5BP61020 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB5BP61020 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14.88□□□□□ -0.03
RAB5BP61020 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC14.88□□□□□ -0.03
RAB5BP61020 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RAB5BP61020 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB5BP61020 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB5BP61020 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAB5BP61020 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RAB5BP61020 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB5BP61020 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB5BP61020 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB5BP61020 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAB5BP61020 AC022211.2-201ENST00000585075 2527 ntBASIC14.88□□□□□ -0.03
RAB5BP61020 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RAB5BP61020 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RAB5BP61020 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
RAB5BP61020 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB5BP61020 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB5BP61020 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB5BP61020 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB5BP61020 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB5BP61020 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB5BP61020 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB5BP61020 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB5BP61020 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB5BP61020 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB5BP61020 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RAB5BP61020 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
RAB5BP61020 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB5BP61020 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RAB5BP61020 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB5BP61020 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB5BP61020 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.87□□□□□ -0.03
RAB5BP61020 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB5BP61020 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC14.87□□□□□ -0.03
RAB5BP61020 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC14.87□□□□□ -0.03
RAB5BP61020 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB5BP61020 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB5BP61020 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.87□□□□□ -0.03
RAB5BP61020 GOLGA2P11-201ENST00000562660 1621 ntBASIC14.87□□□□□ -0.03
RAB5BP61020 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.87□□□□□ -0.03
RAB5BP61020 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB5BP61020 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAB5BP61020 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB5BP61020 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
RAB5BP61020 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
RAB5BP61020 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAB5BP61020 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms