Protein–RNA interactions for Protein: P55773

CCL23, C-C motif chemokine 23, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL23P55773 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCL23P55773 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCL23P55773 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCL23P55773 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.63■□□□□ 0.89
CCL23P55773 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.63■□□□□ 0.89
CCL23P55773 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCL23P55773 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCL23P55773 AC012615.1-201ENST00000565797 1299 ntBASIC20.63■□□□□ 0.89
CCL23P55773 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.63■□□□□ 0.89
CCL23P55773 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCL23P55773 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCL23P55773 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCL23P55773 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CCL23P55773 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCL23P55773 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCL23P55773 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCL23P55773 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.63■□□□□ 0.89
CCL23P55773 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CCL23P55773 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CCL23P55773 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCL23P55773 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.62■□□□□ 0.89
CCL23P55773 AL162377.1-201ENST00000618844 1793 ntBASIC20.62■□□□□ 0.89
CCL23P55773 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.62■□□□□ 0.89
CCL23P55773 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCL23P55773 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.62■□□□□ 0.89
CCL23P55773 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.62■□□□□ 0.89
CCL23P55773 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.62■□□□□ 0.89
CCL23P55773 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCL23P55773 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.62■□□□□ 0.89
CCL23P55773 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCL23P55773 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCL23P55773 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
CCL23P55773 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CCL23P55773 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCL23P55773 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCL23P55773 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCL23P55773 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCL23P55773 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.61■□□□□ 0.89
CCL23P55773 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.61■□□□□ 0.89
CCL23P55773 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.61■□□□□ 0.89
CCL23P55773 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
CCL23P55773 AC138894.3-201ENST00000603787 634 ntBASIC20.61■□□□□ 0.89
CCL23P55773 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.61■□□□□ 0.89
CCL23P55773 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCL23P55773 CLDN5-201ENST00000403084 2357 ntBASIC20.61■□□□□ 0.89
CCL23P55773 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCL23P55773 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCL23P55773 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.61■□□□□ 0.89
CCL23P55773 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCL23P55773 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCL23P55773 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCL23P55773 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCL23P55773 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CCL23P55773 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCL23P55773 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CCL23P55773 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.6■□□□□ 0.89
CCL23P55773 Z83836.1-201ENST00000624605 1642 ntBASIC20.6■□□□□ 0.89
CCL23P55773 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCL23P55773 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCL23P55773 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCL23P55773 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCL23P55773 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCL23P55773 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCL23P55773 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.6■□□□□ 0.89
CCL23P55773 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCL23P55773 AP002469.2-201ENST00000531724 424 ntBASIC20.6■□□□□ 0.89
CCL23P55773 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCL23P55773 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.6■□□□□ 0.89
CCL23P55773 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.6■□□□□ 0.89
CCL23P55773 SLC25A6P4-201ENST00000586535 553 ntBASIC20.6■□□□□ 0.89
CCL23P55773 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.6■□□□□ 0.89
CCL23P55773 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCL23P55773 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCL23P55773 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.6■□□□□ 0.89
CCL23P55773 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCL23P55773 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCL23P55773 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCL23P55773 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.6■□□□□ 0.89
CCL23P55773 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.59■□□□□ 0.89
CCL23P55773 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
CCL23P55773 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCL23P55773 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCL23P55773 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.59■□□□□ 0.89
CCL23P55773 AC104819.1-201ENST00000504587 486 ntBASIC20.59■□□□□ 0.89
CCL23P55773 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.59■□□□□ 0.89
CCL23P55773 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
CCL23P55773 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.59■□□□□ 0.89
CCL23P55773 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCL23P55773 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCL23P55773 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CCL23P55773 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCL23P55773 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCL23P55773 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCL23P55773 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCL23P55773 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCL23P55773 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.58■□□□□ 0.89
CCL23P55773 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCL23P55773 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCL23P55773 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCL23P55773 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms