Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC25A1P53007 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC25A1P53007 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC25A1P53007 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC25A1P53007 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC25A1P53007 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC25A1P53007 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC25A1P53007 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC25A1P53007 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC25A1P53007 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SLC25A1P53007 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC25A1P53007 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC25A1P53007 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC25A1P53007 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
SLC25A1P53007 AL355802.2-201ENST00000402069 882 ntBASIC16.86■□□□□ 0.29
SLC25A1P53007 POU5F1P3-201ENST00000428824 1078 ntBASIC16.86■□□□□ 0.29
SLC25A1P53007 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SLC25A1P53007 KRT16P5-201ENST00000455284 522 ntBASIC16.86■□□□□ 0.29
SLC25A1P53007 AC026366.1-201ENST00000488803 879 ntBASIC16.86■□□□□ 0.29
SLC25A1P53007 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.86■□□□□ 0.29
SLC25A1P53007 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.86■□□□□ 0.29
SLC25A1P53007 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SLC25A1P53007 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SLC25A1P53007 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.86■□□□□ 0.29
SLC25A1P53007 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
SLC25A1P53007 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC25A1P53007 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC16.86■□□□□ 0.29
SLC25A1P53007 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.86■□□□□ 0.29
SLC25A1P53007 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SLC25A1P53007 AC073592.3-201ENST00000625118 1834 ntBASIC16.86■□□□□ 0.29
SLC25A1P53007 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC25A1P53007 AL354751.1-201ENST00000412768 1863 ntBASIC16.86■□□□□ 0.29
SLC25A1P53007 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SLC25A1P53007 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.86■□□□□ 0.29
SLC25A1P53007 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SLC25A1P53007 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC25A1P53007 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC25A1P53007 HEIH-201ENST00000623091 1652 ntBASIC16.85■□□□□ 0.29
SLC25A1P53007 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC25A1P53007 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC25A1P53007 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC25A1P53007 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC25A1P53007 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC25A1P53007 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.85■□□□□ 0.29
SLC25A1P53007 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC25A1P53007 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC25A1P53007 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC16.85■□□□□ 0.29
SLC25A1P53007 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.85■□□□□ 0.29
SLC25A1P53007 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC25A1P53007 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.85■□□□□ 0.29
SLC25A1P53007 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC25A1P53007 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC25A1P53007 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC25A1P53007 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC25A1P53007 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SLC25A1P53007 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC25A1P53007 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SLC25A1P53007 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.85■□□□□ 0.29
SLC25A1P53007 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.85■□□□□ 0.29
SLC25A1P53007 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SLC25A1P53007 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SLC25A1P53007 RCC2P6-201ENST00000526625 1557 ntBASIC16.85■□□□□ 0.29
SLC25A1P53007 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SLC25A1P53007 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.84■□□□□ 0.29
SLC25A1P53007 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SLC25A1P53007 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC25A1P53007 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC25A1P53007 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.84■□□□□ 0.29
SLC25A1P53007 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
SLC25A1P53007 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
SLC25A1P53007 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC25A1P53007 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.84■□□□□ 0.29
SLC25A1P53007 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC25A1P53007 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC25A1P53007 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SLC25A1P53007 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
SLC25A1P53007 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC25A1P53007 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC25A1P53007 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC25A1P53007 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SLC25A1P53007 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SLC25A1P53007 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC25A1P53007 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SLC25A1P53007 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC25A1P53007 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.84■□□□□ 0.29
SLC25A1P53007 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC25A1P53007 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SLC25A1P53007 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC25A1P53007 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.83■□□□□ 0.29
SLC25A1P53007 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
SLC25A1P53007 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SLC25A1P53007 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC25A1P53007 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC25A1P53007 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC25A1P53007 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC25A1P53007 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.83■□□□□ 0.28
SLC25A1P53007 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SLC25A1P53007 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC25A1P53007 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SLC25A1P53007 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms