Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
POLR2JP52435 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
POLR2JP52435 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2JP52435 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2JP52435 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2JP52435 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2JP52435 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2JP52435 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.15■□□□□ 0.5
POLR2JP52435 AL133373.2-201ENST00000623187 2828 ntBASIC18.15■□□□□ 0.5
POLR2JP52435 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2JP52435 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.15■□□□□ 0.5
POLR2JP52435 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.15■□□□□ 0.5
POLR2JP52435 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
POLR2JP52435 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.15■□□□□ 0.5
POLR2JP52435 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.15■□□□□ 0.5
POLR2JP52435 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
POLR2JP52435 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
POLR2JP52435 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.15■□□□□ 0.5
POLR2JP52435 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
POLR2JP52435 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2JP52435 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2JP52435 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2JP52435 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
POLR2JP52435 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
POLR2JP52435 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2JP52435 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2JP52435 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2JP52435 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2JP52435 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
POLR2JP52435 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
POLR2JP52435 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
POLR2JP52435 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
POLR2JP52435 AC090340.1-201ENST00000620778 4980 ntBASIC18.14■□□□□ 0.5
POLR2JP52435 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
POLR2JP52435 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
POLR2JP52435 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
POLR2JP52435 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
POLR2JP52435 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
POLR2JP52435 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
POLR2JP52435 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.14■□□□□ 0.5
POLR2JP52435 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.14■□□□□ 0.49
POLR2JP52435 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
POLR2JP52435 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
POLR2JP52435 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
POLR2JP52435 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.14■□□□□ 0.49
POLR2JP52435 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR2JP52435 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.14■□□□□ 0.49
POLR2JP52435 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR2JP52435 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR2JP52435 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.14■□□□□ 0.49
POLR2JP52435 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.14■□□□□ 0.49
POLR2JP52435 TSPY6P-201ENST00000448518 926 ntBASIC18.14■□□□□ 0.49
POLR2JP52435 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
POLR2JP52435 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.14■□□□□ 0.49
POLR2JP52435 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR2JP52435 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.14■□□□□ 0.49
POLR2JP52435 SOX15-203ENST00000570788 1093 ntBASIC18.14■□□□□ 0.49
POLR2JP52435 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.14■□□□□ 0.49
POLR2JP52435 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
POLR2JP52435 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.14■□□□□ 0.49
POLR2JP52435 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR2JP52435 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR2JP52435 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR2JP52435 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR2JP52435 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR2JP52435 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.14■□□□□ 0.49
POLR2JP52435 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
POLR2JP52435 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.14■□□□□ 0.49
POLR2JP52435 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
POLR2JP52435 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLR2JP52435 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
POLR2JP52435 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
POLR2JP52435 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
POLR2JP52435 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
POLR2JP52435 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLR2JP52435 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLR2JP52435 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLR2JP52435 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
POLR2JP52435 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLR2JP52435 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLR2JP52435 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
POLR2JP52435 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
POLR2JP52435 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLR2JP52435 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLR2JP52435 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLR2JP52435 GLI3-203ENST00000437480 451 ntTSL 2 BASIC18.13■□□□□ 0.49
POLR2JP52435 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.13■□□□□ 0.49
POLR2JP52435 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.13■□□□□ 0.49
POLR2JP52435 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.13■□□□□ 0.49
POLR2JP52435 AC008687.6-201ENST00000596318 630 ntBASIC18.13■□□□□ 0.49
POLR2JP52435 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.13■□□□□ 0.49
POLR2JP52435 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLR2JP52435 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLR2JP52435 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
POLR2JP52435 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLR2JP52435 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
POLR2JP52435 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLR2JP52435 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
POLR2JP52435 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR2JP52435 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms