Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A6P48664 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SLC1A6P48664 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A6P48664 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A6P48664 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.66■□□□□ 0.58
SLC1A6P48664 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A6P48664 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A6P48664 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A6P48664 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A6P48664 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SLC1A6P48664 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A6P48664 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC1A6P48664 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC1A6P48664 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
SLC1A6P48664 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A6P48664 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.66■□□□□ 0.58
SLC1A6P48664 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A6P48664 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A6P48664 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A6P48664 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A6P48664 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A6P48664 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A6P48664 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A6P48664 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A6P48664 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
SLC1A6P48664 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.66■□□□□ 0.58
SLC1A6P48664 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.66■□□□□ 0.58
SLC1A6P48664 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A6P48664 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A6P48664 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A6P48664 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC1A6P48664 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
SLC1A6P48664 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC1A6P48664 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SLC1A6P48664 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.65■□□□□ 0.58
SLC1A6P48664 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
SLC1A6P48664 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A6P48664 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A6P48664 AP000997.3-201ENST00000623333 2250 ntBASIC18.65■□□□□ 0.58
SLC1A6P48664 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A6P48664 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A6P48664 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.65■□□□□ 0.58
SLC1A6P48664 AL050303.2-201ENST00000619798 666 ntBASIC18.65■□□□□ 0.58
SLC1A6P48664 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A6P48664 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.65■□□□□ 0.58
SLC1A6P48664 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A6P48664 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A6P48664 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
SLC1A6P48664 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.65■□□□□ 0.58
SLC1A6P48664 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SLC1A6P48664 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SLC1A6P48664 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC1A6P48664 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A6P48664 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A6P48664 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC1A6P48664 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.64■□□□□ 0.58
SLC1A6P48664 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SLC1A6P48664 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.58
SLC1A6P48664 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A6P48664 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A6P48664 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A6P48664 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A6P48664 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.64■□□□□ 0.57
SLC1A6P48664 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A6P48664 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A6P48664 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A6P48664 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A6P48664 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A6P48664 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A6P48664 DUSP5P2-201ENST00000426873 1033 ntBASIC18.64■□□□□ 0.57
SLC1A6P48664 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SLC1A6P48664 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.64■□□□□ 0.57
SLC1A6P48664 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A6P48664 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A6P48664 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A6P48664 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A6P48664 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.64■□□□□ 0.57
SLC1A6P48664 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.64■□□□□ 0.57
SLC1A6P48664 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A6P48664 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A6P48664 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A6P48664 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A6P48664 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A6P48664 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
SLC1A6P48664 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A6P48664 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A6P48664 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
SLC1A6P48664 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SLC1A6P48664 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A6P48664 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A6P48664 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A6P48664 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC1A6P48664 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC1A6P48664 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A6P48664 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A6P48664 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A6P48664 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SLC1A6P48664 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
SLC1A6P48664 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.63■□□□□ 0.57
SLC1A6P48664 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms