Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 SEPT2-226ENST00000461048 1163 ntTSL 1 (best)23.62■■□□□ 1.373e-18■■■□□ 18.9
MATR3P43243 ZNF704-204ENST00000519936 712 ntTSL 523.6■■□□□ 1.371e-7■■■□□ 18.9
MATR3P43243 SEPT2-215ENST00000429791 724 ntTSL 423.53■■□□□ 1.363e-18■■■□□ 18.9
MATR3P43243 SEPT2-231ENST00000469175 486 ntTSL 323.33■■□□□ 1.333e-18■■■□□ 18.9
MATR3P43243 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.1■■□□□ 1.292e-9■■■□□ 18.9
MATR3P43243 PSMA4-218ENST00000560099 2596 ntTSL 222.75■■□□□ 1.232e-9■■■□□ 18.9
MATR3P43243 SEPT2-210ENST00000420786 539 ntTSL 521.72■■□□□ 1.073e-18■■■□□ 18.9
MATR3P43243 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.88■□□□□ 0.775e-11■■■□□ 18.9
MATR3P43243 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.755e-11■■■□□ 18.9
MATR3P43243 PDLIM7-207ENST00000486828 1904 ntTSL 1 (best)19.66■□□□□ 0.745e-11■■■□□ 18.9
MATR3P43243 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.735e-11■■■□□ 18.9
MATR3P43243 PDLIM7-208ENST00000493815 1686 ntTSL 1 (best)19.59■□□□□ 0.735e-11■■■□□ 18.9
MATR3P43243 LARGE1-210ENST00000434071 562 ntTSL 419.32■□□□□ 0.682e-9■■■□□ 18.9
MATR3P43243 SEPT2-218ENST00000437066 574 ntTSL 419.25■□□□□ 0.673e-18■■■□□ 18.9
MATR3P43243 SEPT2-242ENST00000492978 775 ntTSL 319■□□□□ 0.633e-18■■■□□ 18.9
MATR3P43243 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.24■□□□□ 0.515e-11■■■□□ 18.9
MATR3P43243 LARGE1-213ENST00000494763 537 ntTSL 418.2■□□□□ 0.52e-9■■■□□ 18.9
MATR3P43243 ZNF704-205ENST00000520336 686 ntTSL 517.98■□□□□ 0.471e-7■■■□□ 18.9
MATR3P43243 AC090825.1-201ENST00000559714 542 ntTSL 417.52■□□□□ 0.42e-9■■■□□ 18.9
MATR3P43243 PDLIM7-213ENST00000505074 931 ntTSL 317.5■□□□□ 0.395e-11■■■□□ 18.9
MATR3P43243 LARGE1-208ENST00000430220 559 ntTSL 417.42■□□□□ 0.382e-9■■■□□ 18.9
MATR3P43243 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.312e-9■■■□□ 18.9
MATR3P43243 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.85■□□□□ 0.292e-9■■■□□ 18.9
MATR3P43243 LARGE1-204ENST00000413114 773 ntTSL 416.83■□□□□ 0.282e-9■■■□□ 18.9
MATR3P43243 TMEM63B-208ENST00000532634 828 ntTSL 316.62■□□□□ 0.252e-9■■■□□ 18.9
MATR3P43243 TMEM63B-203ENST00000371893 2921 ntTSL 1 (best)16.46■□□□□ 0.222e-9■■■□□ 18.9
MATR3P43243 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.092e-9■■■□□ 18.9
MATR3P43243 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC15.34■□□□□ 0.052e-9■■■□□ 18.9
MATR3P43243 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC15.2■□□□□ 0.022e-9■■■□□ 18.9
MATR3P43243 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC15.12■□□□□ 0.012e-9■■■□□ 18.9
MATR3P43243 PPP2R3C-218ENST00000557278 896 ntTSL 1 (best)14.98□□□□□ -0.016e-14■■■□□ 18.9
MATR3P43243 PPP2R3C-202ENST00000553273 1402 ntTSL 1 (best)14.87□□□□□ -0.036e-14■■■□□ 18.9
MATR3P43243 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC14.79□□□□□ -0.041e-6■■■□□ 18.9
MATR3P43243 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.056e-14■■■□□ 18.9
MATR3P43243 PFDN1-206ENST00000514611 1139 ntTSL 214.54□□□□□ -0.086e-8■■■□□ 18.9
MATR3P43243 TMEM63B-206ENST00000525873 807 ntTSL 214.48□□□□□ -0.092e-9■■■□□ 18.9
MATR3P43243 LARGE1-202ENST00000397394 4138 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.112e-9■■■□□ 18.9
MATR3P43243 TMEM63B-210ENST00000534326 1934 ntTSL 214.16□□□□□ -0.142e-9■■■□□ 18.9
MATR3P43243 TMEM63B-201ENST00000259746 3318 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.182e-9■■■□□ 18.9
MATR3P43243 TMEM63B-207ENST00000527188 478 ntTSL 313.47□□□□□ -0.252e-9■■■□□ 18.9
MATR3P43243 PSMA4-219ENST00000560217 944 ntTSL 5 BASIC12.79□□□□□ -0.362e-9■■■□□ 18.9
MATR3P43243 PPP2R3C-201ENST00000261475 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.376e-14■■■□□ 18.9
MATR3P43243 PFDN1-201ENST00000261813 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.396e-8■■■□□ 18.9
MATR3P43243 SEPT2-235ENST00000475823 371 ntTSL 312.32□□□□□ -0.443e-18■■■□□ 18.9
MATR3P43243 PPP2R3C-217ENST00000557217 1846 ntTSL 1 (best)11.78□□□□□ -0.526e-14■■■□□ 18.9
MATR3P43243 PPP2R3C-204ENST00000554222 1719 ntTSL 211.77□□□□□ -0.526e-14■■■□□ 18.9
MATR3P43243 PSMA4-207ENST00000558635 736 ntTSL 1 (best)11.37□□□□□ -0.592e-9■■■□□ 18.9
MATR3P43243 KPNA5-201ENST00000356348 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.594e-6■■■□□ 18.9
MATR3P43243 PFDN1-203ENST00000510217 1091 ntTSL 2 BASIC11.22□□□□□ -0.616e-8■■■□□ 18.9
MATR3P43243 SEPT2-224ENST00000457335 570 ntTSL 411.14□□□□□ -0.633e-18■■■□□ 18.9
MATR3P43243 RFX3-210ENST00000457373 822 ntTSL 511.07□□□□□ -0.642e-9■■■□□ 18.9
MATR3P43243 SEPT2-212ENST00000425899 738 ntTSL 510.97□□□□□ -0.653e-18■■■□□ 18.9
MATR3P43243 SEPT2-214ENST00000428524 644 ntTSL 510.97□□□□□ -0.653e-18■■■□□ 18.9
MATR3P43243 MAOA-201ENST00000338702 4015 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.661e-6■■■□□ 18.9
MATR3P43243 LARGE1-207ENST00000423375 568 ntTSL 410.88□□□□□ -0.672e-9■■■□□ 18.9
MATR3P43243 PPP2R3C-213ENST00000555644 1347 ntTSL 2 BASIC10.67□□□□□ -0.76e-14■■■□□ 18.9
MATR3P43243 RFX3-201ENST00000302303 1522 ntTSL 1 (best) BASIC10.31□□□□□ -0.762e-9■■■□□ 18.9
MATR3P43243 TMEM63B-204ENST00000497371 616 ntTSL 510.28□□□□□ -0.762e-9■■■□□ 18.9
MATR3P43243 SEPT2-230ENST00000467971 571 ntTSL 210.2□□□□□ -0.783e-18■■■□□ 18.9
MATR3P43243 MAOA-203ENST00000497485 935 ntTSL 510.14□□□□□ -0.791e-6■■■□□ 18.9
MATR3P43243 LARGE1-209ENST00000432776 560 ntTSL 410.03□□□□□ -0.82e-9■■■□□ 18.9
MATR3P43243 PSMA4-216ENST00000559948 710 ntTSL 59.54□□□□□ -0.882e-9■■■□□ 18.9
MATR3P43243 RFX3-209ENST00000451859 740 ntTSL 39.52□□□□□ -0.892e-9■■■□□ 18.9
MATR3P43243 PPP2R3C-207ENST00000554488 593 ntTSL 29.5□□□□□ -0.896e-14■■■□□ 18.9
MATR3P43243 PPP2R3C-212ENST00000555630 712 ntTSL 59.04□□□□□ -0.966e-14■■■□□ 18.9
MATR3P43243 PPP2R3C-220ENST00000557773 988 ntTSL 29.04□□□□□ -0.966e-14■■■□□ 18.9
MATR3P43243 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC8.96□□□□□ -0.986e-8■■■□□ 18.9
MATR3P43243 PSMA4-213ENST00000559437 756 ntTSL 58.93□□□□□ -0.982e-9■■■□□ 18.9
MATR3P43243 PPP2R3C-219ENST00000557288 492 ntTSL 58.83□□□□□ -16e-14■■■□□ 18.9
MATR3P43243 PSMA4-210ENST00000559146 674 ntTSL 28.61□□□□□ -1.032e-9■■■□□ 18.9
MATR3P43243 PPP2R3C-215ENST00000556254 913 ntTSL 28.56□□□□□ -1.046e-14■■■□□ 18.9
MATR3P43243 PPM1H-205ENST00000551519 584 ntTSL 48.55□□□□□ -1.042e-6■■■□□ 18.9
MATR3P43243 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.051e-6■■■□□ 18.9
MATR3P43243 CEP192-211ENST00000513432 8635 ntTSL 1 (best)8.33□□□□□ -1.081e-6■■■□□ 18.9
MATR3P43243 SEPT2-219ENST00000441533 372 ntTSL 58.32□□□□□ -1.083e-18■■■□□ 18.9
MATR3P43243 SEPT2-207ENST00000407017 650 ntTSL 48.19□□□□□ -1.13e-18■■■□□ 18.9
MATR3P43243 SEPT2-221ENST00000445030 575 ntTSL 38.19□□□□□ -1.13e-18■■■□□ 18.9
MATR3P43243 PSMA4-208ENST00000558639 733 ntTSL 38.15□□□□□ -1.12e-9■■■□□ 18.9
MATR3P43243 VMP1-213ENST00000591877 791 ntTSL 38.08□□□□□ -1.126e-14■■■□□ 18.9
MATR3P43243 PSMA4-203ENST00000557929 635 ntTSL 58.02□□□□□ -1.132e-9■■■□□ 18.9
MATR3P43243 PSMA4-217ENST00000560033 570 ntTSL 47.67□□□□□ -1.182e-9■■■□□ 18.9
MATR3P43243 PPP2R3C-206ENST00000554361 684 ntTSL 56.85□□□□□ -1.316e-14■■■□□ 18.9
MATR3P43243 PPP2R3C-205ENST00000554265 1029 ntTSL 26.85□□□□□ -1.316e-14■■■□□ 18.9
MATR3P43243 SEPT2-220ENST00000443492 558 ntTSL 56.4□□□□□ -1.383e-18■■■□□ 18.9
MATR3P43243 SEPT2-241ENST00000484740 563 ntTSL 36.32□□□□□ -1.43e-18■■■□□ 18.9
MATR3P43243 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.412e-9■■■□□ 18.9
MATR3P43243 VMP1-215ENST00000592619 838 ntTSL 56.21□□□□□ -1.426e-14■■■□□ 18.9
MATR3P43243 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.421e-7■■■□□ 18.9
MATR3P43243 ITPR2-210ENST00000545902 581 ntTSL 35.61□□□□□ -1.513e-6■■■□□ 18.9
MATR3P43243 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.512e-9■■■□□ 18.9
MATR3P43243 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.521e-6■■■□□ 18.9
MATR3P43243 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.17□□□□□ -1.581e-6■■■□□ 18.9
MATR3P43243 PPP2R3C-203ENST00000553282 479 ntTSL 54.73□□□□□ -1.656e-14■■■□□ 18.9
MATR3P43243 PPP2R3C-209ENST00000554899 762 ntTSL 34.68□□□□□ -1.666e-14■■■□□ 18.9
MATR3P43243 PPP2R3C-208ENST00000554563 469 ntTSL 34.65□□□□□ -1.676e-14■■■□□ 18.9
MATR3P43243 PPP2R3C-214ENST00000555726 546 ntTSL 34.61□□□□□ -1.676e-14■■■□□ 18.9
MATR3P43243 PSMA4-220ENST00000560737 815 ntTSL 54.59□□□□□ -1.672e-9■■■□□ 18.9
MATR3P43243 SEPT2-232ENST00000469434 583 ntTSL 34.44□□□□□ -1.73e-18■■■□□ 18.9
MATR3P43243 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4□□□□□ -1.772e-9■■■□□ 18.9
MATR3P43243 PSMA4-221ENST00000560842 574 ntTSL 1 (best)3.9□□□□□ -1.792e-9■■■□□ 18.9
Retrieved 100 of 16,209 protein–RNA pairs in 146 ms