RNA–Protein interactions for RNA: ENST00000559437.5

PSMA4-213, Transcript of proteasome subunit alpha 4, humanhuman

TSL 5

Gene PSMA4, Length 756 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-213ENST00000559437 CHIC1Q5VXU3 224 aa23.42■■□□□ 1.34
PSMA4-213ENST00000559437 AEBP2Q6ZN18 517 aaPredicted RBP23.23■■□□□ 1.31
PSMA4-213ENST00000559437 PHF23Q9BUL5 403 aaPredicted RBP20.7■□□□□ 0.9
PSMA4-213ENST00000559437 SENP3Q9H4L4 574 aaPredicted RBP19.86■□□□□ 0.77
PSMA4-213ENST00000559437 NISCHQ9Y2I1 1504 aa19.6■□□□□ 0.73
PSMA4-213ENST00000559437 PLPPR3Q6T4P5 718 aa19.36■□□□□ 0.69
PSMA4-213ENST00000559437 FOXD1Q16676 465 aa18.42■□□□□ 0.54
PSMA4-213ENST00000559437 ADRA2BP18089 450 aa18.13■□□□□ 0.49
PSMA4-213ENST00000559437 PPP6R1Q9UPN7 881 aa18.02■□□□□ 0.48
PSMA4-213ENST00000559437 KCNA4P22459 653 aa17.64■□□□□ 0.41
PSMA4-213ENST00000559437 CCDC180Q9P1Z9 1646 aa17.39■□□□□ 0.37
PSMA4-213ENST00000559437 EHMT2Q96KQ7 1210 aa17.33■□□□□ 0.36
PSMA4-213ENST00000559437 MSH5O43196 834 aa17.28■□□□□ 0.36
PSMA4-213ENST00000559437 PIAS4Q8N2W9 510 aaPredicted RBP17.28■□□□□ 0.36
PSMA4-213ENST00000559437 PPP4R3CPQ6ZMV5 832 aa17.17■□□□□ 0.34
PSMA4-213ENST00000559437 ABCC9O60706 1549 aa16.93■□□□□ 0.3
PSMA4-213ENST00000559437 NCBP3Q53F19 620 aaKnown RBP16.93■□□□□ 0.3
PSMA4-213ENST00000559437 SLC4A1APQ9BWU0 796 aaKnown RBP16.93■□□□□ 0.3
PSMA4-213ENST00000559437 CSRNP3Q8WYN3 585 aa16.79■□□□□ 0.28
PSMA4-213ENST00000559437 NPM3O75607 178 aaKnown RBP16.69■□□□□ 0.26
PSMA4-213ENST00000559437 POTEDQ86YR6 584 aa16.55■□□□□ 0.24
PSMA4-213ENST00000559437 CNKSR2Q8WXI2 1034 aa16.52■□□□□ 0.24
PSMA4-213ENST00000559437 SCAF1Q9H7N4 1312 aaKnown RBP16.49■□□□□ 0.23
PSMA4-213ENST00000559437 ZCCHC6Q5VYS8 1495 aaKnown RBP16.38■□□□□ 0.21
PSMA4-213ENST00000559437 DCAF8L2P0C7V8 631 aa16.35■□□□□ 0.21
PSMA4-213ENST00000559437 NACADO15069 1562 aa16.34■□□□□ 0.21
PSMA4-213ENST00000559437 RB1CC1Q8TDY2 1594 aa16.34■□□□□ 0.21
PSMA4-213ENST00000559437 MYO15BQ96JP2 1530 aa16.26■□□□□ 0.19
PSMA4-213ENST00000559437 DCAF1Q9Y4B6 1507 aa16.24■□□□□ 0.19
PSMA4-213ENST00000559437 ZBTB22O15209 634 aa16.24■□□□□ 0.19
PSMA4-213ENST00000559437 MAPK8IP2Q13387 824 aaPredicted RBP16.15■□□□□ 0.18
PSMA4-213ENST00000559437 DNAJC5BQ9UF47 199 aa16.07■□□□□ 0.16
PSMA4-213ENST00000559437 FOXD4L1Q9NU39 408 aa16■□□□□ 0.15
PSMA4-213ENST00000559437 RNF216Q9NWF9 866 aaPredicted RBP16■□□□□ 0.15
PSMA4-213ENST00000559437 UNC13AQ9UPW8 1703 aa15.96■□□□□ 0.15
PSMA4-213ENST00000559437 SCRIBQ14160 1630 aa15.86■□□□□ 0.13
PSMA4-213ENST00000559437 PABPN1Q86U42 306 aaKnown RBP eCLIP15.82■□□□□ 0.12
PSMA4-213ENST00000559437 BICRAQ9NZM4 1560 aa15.79■□□□□ 0.12
PSMA4-213ENST00000559437 DMRT2Q9Y5R5 561 aa15.75■□□□□ 0.11
PSMA4-213ENST00000559437 HOXD11P31277 338 aaPredicted RBP15.73■□□□□ 0.11
PSMA4-213ENST00000559437 SHROOM4Q9ULL8 1493 aa15.7■□□□□ 0.1
PSMA4-213ENST00000559437 SLC4A2P04920 1241 aa15.57■□□□□ 0.08
PSMA4-213ENST00000559437 MYCNP04198 464 aaPredicted RBP15.4■□□□□ 0.06
PSMA4-213ENST00000559437 EIF4G1Q04637 1599 aaKnown RBP15.4■□□□□ 0.06
PSMA4-213ENST00000559437 ATXN8OSP0DMR3 200 aa15.38■□□□□ 0.05
PSMA4-213ENST00000559437 CC2D2AQ9P2K1 1620 aa15.31■□□□□ 0.04
PSMA4-213ENST00000559437 CECR2Q9BXF3 1484 aa15.24■□□□□ 0.03
PSMA4-213ENST00000559437 BAZ1AQ9NRL2 1556 aaPredicted RBP15.19■□□□□ 0.02
PSMA4-213ENST00000559437 SMARCA4P51532 1647 aa15.18■□□□□ 0.02
PSMA4-213ENST00000559437 FKBP8Q14318 412 aa15.12■□□□□ 0.01
PSMA4-213ENST00000559437 AMER1Q5JTC6 1135 aaPredicted RBP15.12■□□□□ 0.01
PSMA4-213ENST00000559437 RTN4Q9NQC3 1192 aaKnown RBP15.11■□□□□ 0.01
PSMA4-213ENST00000559437 MROH2BQ7Z745 1585 aa15.11■□□□□ 0.01
PSMA4-213ENST00000559437 SMARCA2P51531 1590 aa15.09■□□□□ 0.01
PSMA4-213ENST00000559437 DCAF8L1A6NGE4 600 aa15.08■□□□□ 0
PSMA4-213ENST00000559437 ATAD2BQ9ULI0 1458 aa15.08■□□□□ 0
PSMA4-213ENST00000559437 NCAPD3P42695 1498 aa15.06■□□□□ 0
PSMA4-213ENST00000559437 PEG3Q9GZU2 1588 aa15.05■□□□□ -0
PSMA4-213ENST00000559437 HMGXB3Q12766 1538 aa15.01□□□□□ -0.01
PSMA4-213ENST00000559437 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15□□□□□ -0.01
PSMA4-213ENST00000559437 RSF1Q96T23 1441 aaPredicted RBP15□□□□□ -0.01
PSMA4-213ENST00000559437 WIZO95785 1651 aa14.98□□□□□ -0.01
PSMA4-213ENST00000559437 BAZ1BQ9UIG0 1483 aaKnown RBP14.98□□□□□ -0.01
PSMA4-213ENST00000559437 ATF5Q9Y2D1 282 aaPredicted RBP14.95□□□□□ -0.02
PSMA4-213ENST00000559437 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.9□□□□□ -0.02
PSMA4-213ENST00000559437 HNRNPUL2Q1KMD3 747 aaKnown RBP14.9□□□□□ -0.02
PSMA4-213ENST00000559437 SLC24A1O60721 1099 aa14.89□□□□□ -0.03
PSMA4-213ENST00000559437 SAMD1Q6SPF0 538 aaPredicted RBP14.88□□□□□ -0.03
PSMA4-213ENST00000559437 U3KPZ7 1027 aaPredicted RBP14.84□□□□□ -0.03
PSMA4-213ENST00000559437 TOP2AP11388 1531 aaKnown RBP14.81□□□□□ -0.04
PSMA4-213ENST00000559437 RNF39Q9H2S5 420 aa14.71□□□□□ -0.05
PSMA4-213ENST00000559437 CACNB1Q02641 598 aaPredicted RBP14.7□□□□□ -0.06
PSMA4-213ENST00000559437 SUPT5HO00267 1087 aaKnown RBP14.68□□□□□ -0.06
PSMA4-213ENST00000559437 LAMC3Q9Y6N6 1575 aa14.67□□□□□ -0.06
PSMA4-213ENST00000559437 NESP48681 1621 aa14.65□□□□□ -0.06
PSMA4-213ENST00000559437 CADPSQ9ULU8 1353 aa14.63□□□□□ -0.07
PSMA4-213ENST00000559437 ERCC6Q03468 1493 aa14.63□□□□□ -0.07
PSMA4-213ENST00000559437 CCDC88BA6NC98 1476 aa14.62□□□□□ -0.07
PSMA4-213ENST00000559437 ZNF219Q9P2Y4 722 aaPredicted RBP14.61□□□□□ -0.07
PSMA4-213ENST00000559437 PDS5BQ9NTI5 1447 aa14.58□□□□□ -0.07
PSMA4-213ENST00000559437 APLP2Q06481 763 aa14.56□□□□□ -0.08
PSMA4-213ENST00000559437 CFTRP13569 1480 aa14.56□□□□□ -0.08
PSMA4-213ENST00000559437 C1QBPQ07021 282 aaKnown RBP14.55□□□□□ -0.08
PSMA4-213ENST00000559437 PRDM2Q13029 1718 aa14.52□□□□□ -0.09
PSMA4-213ENST00000559437 KIF21AQ7Z4S6 1674 aa14.49□□□□□ -0.09
PSMA4-213ENST00000559437 FANCD2Q9BXW9 1451 aa14.46□□□□□ -0.09
PSMA4-213ENST00000559437 CEP164Q9UPV0 1460 aa14.46□□□□□ -0.09
PSMA4-213ENST00000559437 CUX2O14529 1486 aa14.43□□□□□ -0.1
PSMA4-213ENST00000559437 THOC2Q8NI27 1593 aaKnown RBP14.43□□□□□ -0.1
PSMA4-213ENST00000559437 MRC2Q9UBG0 1479 aa14.41□□□□□ -0.1
PSMA4-213ENST00000559437 SPDYE4A6NLX3 237 aa14.38□□□□□ -0.11
PSMA4-213ENST00000559437 FBXO3Q9UK99 471 aa14.38□□□□□ -0.11
PSMA4-213ENST00000559437 WDR62O43379 1518 aa14.35□□□□□ -0.11
PSMA4-213ENST00000559437 MKRN4PQ13434 485 aaPredicted RBP14.33□□□□□ -0.12
PSMA4-213ENST00000559437 URB2Q14146 1524 aaKnown RBP14.3□□□□□ -0.12
PSMA4-213ENST00000559437 ABCC8Q09428 1581 aa14.26□□□□□ -0.13
PSMA4-213ENST00000559437 FBLN2P98095 1184 aa14.25□□□□□ -0.13
PSMA4-213ENST00000559437 TRHP20396 242 aaPredicted RBP14.24□□□□□ -0.13
PSMA4-213ENST00000559437 DNMBPQ6XZF7 1577 aa14.23□□□□□ -0.13
PSMA4-213ENST00000559437 PROM2Q8N271 834 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms