Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.05■□□□□ 0.64
LSP1P33241 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.05■□□□□ 0.64
LSP1P33241 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LSP1P33241 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.05■□□□□ 0.64
LSP1P33241 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LSP1P33241 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LSP1P33241 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LSP1P33241 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.05■□□□□ 0.64
LSP1P33241 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
LSP1P33241 SLC25A6P5-201ENST00000435663 894 ntBASIC19.05■□□□□ 0.64
LSP1P33241 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.05■□□□□ 0.64
LSP1P33241 AP001330.3-201ENST00000520123 633 ntBASIC19.05■□□□□ 0.64
LSP1P33241 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.05■□□□□ 0.64
LSP1P33241 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
LSP1P33241 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LSP1P33241 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.05■□□□□ 0.64
LSP1P33241 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
LSP1P33241 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.05■□□□□ 0.64
LSP1P33241 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
LSP1P33241 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LSP1P33241 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LSP1P33241 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LSP1P33241 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LSP1P33241 RASA4CP-201ENST00000424092 1398 ntBASIC19.05■□□□□ 0.64
LSP1P33241 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
LSP1P33241 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
LSP1P33241 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSP1P33241 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LSP1P33241 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSP1P33241 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSP1P33241 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSP1P33241 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSP1P33241 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSP1P33241 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.04■□□□□ 0.64
LSP1P33241 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
LSP1P33241 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.04■□□□□ 0.64
LSP1P33241 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.04■□□□□ 0.64
LSP1P33241 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.04■□□□□ 0.64
LSP1P33241 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSP1P33241 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSP1P33241 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
LSP1P33241 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LSP1P33241 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LSP1P33241 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.04■□□□□ 0.64
LSP1P33241 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
LSP1P33241 AC116351.2-201ENST00000606540 1585 ntBASIC19.04■□□□□ 0.64
LSP1P33241 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.04■□□□□ 0.64
LSP1P33241 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LSP1P33241 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSP1P33241 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSP1P33241 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LSP1P33241 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSP1P33241 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSP1P33241 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.04■□□□□ 0.64
LSP1P33241 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
LSP1P33241 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSP1P33241 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LSP1P33241 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
LSP1P33241 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.04■□□□□ 0.64
LSP1P33241 AC108860.2-201ENST00000562760 2183 ntBASIC19.03■□□□□ 0.64
LSP1P33241 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.03■□□□□ 0.64
LSP1P33241 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LSP1P33241 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
LSP1P33241 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LSP1P33241 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LSP1P33241 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.03■□□□□ 0.64
LSP1P33241 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.03■□□□□ 0.64
LSP1P33241 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LSP1P33241 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LSP1P33241 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.03■□□□□ 0.64
LSP1P33241 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LSP1P33241 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.03■□□□□ 0.64
LSP1P33241 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LSP1P33241 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LSP1P33241 MIR939-201ENST00000401314 82 ntBASIC19.03■□□□□ 0.64
LSP1P33241 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.03■□□□□ 0.64
LSP1P33241 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.03■□□□□ 0.64
LSP1P33241 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LSP1P33241 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LSP1P33241 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LSP1P33241 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LSP1P33241 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.03■□□□□ 0.64
LSP1P33241 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LSP1P33241 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LSP1P33241 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
LSP1P33241 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LSP1P33241 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.02■□□□□ 0.64
LSP1P33241 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LSP1P33241 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LSP1P33241 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LSP1P33241 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LSP1P33241 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.02■□□□□ 0.64
LSP1P33241 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LSP1P33241 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.02■□□□□ 0.64
LSP1P33241 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
LSP1P33241 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.02■□□□□ 0.64
LSP1P33241 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.02■□□□□ 0.64
LSP1P33241 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.02■□□□□ 0.64
LSP1P33241 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
LSP1P33241 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms