Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3BP20337 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.62■□□□□ 0.25
RAB3BP20337 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3BP20337 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB3BP20337 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3BP20337 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB3BP20337 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB3BP20337 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3BP20337 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB3BP20337 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RAB3BP20337 CNN2P6-201ENST00000439038 900 ntBASIC16.62■□□□□ 0.25
RAB3BP20337 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.62■□□□□ 0.25
RAB3BP20337 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB3BP20337 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
RAB3BP20337 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
RAB3BP20337 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3BP20337 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RAB3BP20337 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RAB3BP20337 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3BP20337 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3BP20337 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3BP20337 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RAB3BP20337 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB3BP20337 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RAB3BP20337 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB3BP20337 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB3BP20337 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RAB3BP20337 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.61■□□□□ 0.25
RAB3BP20337 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.61■□□□□ 0.25
RAB3BP20337 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3BP20337 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3BP20337 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3BP20337 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3BP20337 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RAB3BP20337 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB3BP20337 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RAB3BP20337 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3BP20337 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.61■□□□□ 0.25
RAB3BP20337 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3BP20337 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
RAB3BP20337 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3BP20337 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB3BP20337 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB3BP20337 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.61■□□□□ 0.25
RAB3BP20337 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RAB3BP20337 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3BP20337 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3BP20337 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.61■□□□□ 0.25
RAB3BP20337 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3BP20337 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RAB3BP20337 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3BP20337 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RAB3BP20337 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3BP20337 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3BP20337 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3BP20337 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3BP20337 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RAB3BP20337 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB3BP20337 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3BP20337 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3BP20337 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RAB3BP20337 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3BP20337 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RAB3BP20337 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB3BP20337 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB3BP20337 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB3BP20337 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RAB3BP20337 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3BP20337 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3BP20337 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3BP20337 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3BP20337 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3BP20337 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB3BP20337 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3BP20337 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3BP20337 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3BP20337 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3BP20337 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3BP20337 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3BP20337 CYP2T1P-201ENST00000432607 1285 ntBASIC16.6■□□□□ 0.25
RAB3BP20337 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3BP20337 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3BP20337 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RAB3BP20337 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB3BP20337 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3BP20337 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB3BP20337 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB3BP20337 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB3BP20337 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB3BP20337 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
RAB3BP20337 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RAB3BP20337 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3BP20337 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3BP20337 KRT8P8-201ENST00000434750 1448 ntBASIC16.6■□□□□ 0.25
RAB3BP20337 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB3BP20337 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3BP20337 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3BP20337 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3BP20337 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB3BP20337 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms