Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
APOA4P06727 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
APOA4P06727 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.02■□□□□ 0.64
APOA4P06727 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.02■□□□□ 0.63
APOA4P06727 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
APOA4P06727 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.02■□□□□ 0.63
APOA4P06727 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
APOA4P06727 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.02■□□□□ 0.63
APOA4P06727 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
APOA4P06727 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.01■□□□□ 0.63
APOA4P06727 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
APOA4P06727 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.01■□□□□ 0.63
APOA4P06727 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.01■□□□□ 0.63
APOA4P06727 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.01■□□□□ 0.63
APOA4P06727 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
APOA4P06727 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
APOA4P06727 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
APOA4P06727 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
APOA4P06727 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
APOA4P06727 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
APOA4P06727 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
APOA4P06727 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
APOA4P06727 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.01■□□□□ 0.63
APOA4P06727 RARRES2P10-201ENST00000564312 460 ntBASIC19.01■□□□□ 0.63
APOA4P06727 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
APOA4P06727 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
APOA4P06727 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.01■□□□□ 0.63
APOA4P06727 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.01■□□□□ 0.63
APOA4P06727 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.01■□□□□ 0.63
APOA4P06727 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
APOA4P06727 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.01■□□□□ 0.63
APOA4P06727 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
APOA4P06727 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
APOA4P06727 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
APOA4P06727 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
APOA4P06727 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
APOA4P06727 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
APOA4P06727 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.01■□□□□ 0.63
APOA4P06727 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.01■□□□□ 0.63
APOA4P06727 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
APOA4P06727 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19■□□□□ 0.63
APOA4P06727 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
APOA4P06727 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19■□□□□ 0.63
APOA4P06727 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
APOA4P06727 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19■□□□□ 0.63
APOA4P06727 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19■□□□□ 0.63
APOA4P06727 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
APOA4P06727 AC020763.4-201ENST00000623414 4170 ntBASIC19■□□□□ 0.63
APOA4P06727 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
APOA4P06727 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19■□□□□ 0.63
APOA4P06727 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
APOA4P06727 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
APOA4P06727 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
APOA4P06727 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19■□□□□ 0.63
APOA4P06727 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19■□□□□ 0.63
APOA4P06727 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19■□□□□ 0.63
APOA4P06727 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19■□□□□ 0.63
APOA4P06727 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19■□□□□ 0.63
APOA4P06727 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19■□□□□ 0.63
APOA4P06727 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19■□□□□ 0.63
APOA4P06727 HLA-A-209ENST00000638375 975 ntBASIC19■□□□□ 0.63
APOA4P06727 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
APOA4P06727 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19■□□□□ 0.63
APOA4P06727 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
APOA4P06727 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
APOA4P06727 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
APOA4P06727 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19■□□□□ 0.63
APOA4P06727 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
APOA4P06727 AL135905.2-201ENST00000584934 1404 ntBASIC19■□□□□ 0.63
APOA4P06727 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOA4P06727 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
APOA4P06727 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
APOA4P06727 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOA4P06727 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.99■□□□□ 0.63
APOA4P06727 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.99■□□□□ 0.63
APOA4P06727 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOA4P06727 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
APOA4P06727 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOA4P06727 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.99■□□□□ 0.63
APOA4P06727 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOA4P06727 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
APOA4P06727 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
APOA4P06727 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
APOA4P06727 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.99■□□□□ 0.63
APOA4P06727 AL353708.3-201ENST00000610272 989 ntBASIC18.99■□□□□ 0.63
APOA4P06727 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOA4P06727 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.99■□□□□ 0.63
APOA4P06727 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.99■□□□□ 0.63
APOA4P06727 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.99■□□□□ 0.63
APOA4P06727 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.99■□□□□ 0.63
APOA4P06727 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
APOA4P06727 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
APOA4P06727 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
APOA4P06727 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
APOA4P06727 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
APOA4P06727 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
APOA4P06727 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
APOA4P06727 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.98■□□□□ 0.63
APOA4P06727 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.98■□□□□ 0.63
APOA4P06727 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms