Protein–RNA interactions for Protein: O95447

LCA5L, Lebercilin-like protein, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5LO95447 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCA5LO95447 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCA5LO95447 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCA5LO95447 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCA5LO95447 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.18■□□□□ 0.82
LCA5LO95447 POU5F1P3-201ENST00000428824 1078 ntBASIC20.18■□□□□ 0.82
LCA5LO95447 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.18■□□□□ 0.82
LCA5LO95447 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.18■□□□□ 0.82
LCA5LO95447 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.18■□□□□ 0.82
LCA5LO95447 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCA5LO95447 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.18■□□□□ 0.82
LCA5LO95447 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCA5LO95447 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCA5LO95447 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LCA5LO95447 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.18■□□□□ 0.82
LCA5LO95447 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCA5LO95447 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.18■□□□□ 0.82
LCA5LO95447 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LCA5LO95447 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.18■□□□□ 0.82
LCA5LO95447 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCA5LO95447 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.18■□□□□ 0.82
LCA5LO95447 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LCA5LO95447 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCA5LO95447 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCA5LO95447 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCA5LO95447 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.17■□□□□ 0.82
LCA5LO95447 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC20.17■□□□□ 0.82
LCA5LO95447 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.17■□□□□ 0.82
LCA5LO95447 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LCA5LO95447 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCA5LO95447 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LCA5LO95447 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.17■□□□□ 0.82
LCA5LO95447 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCA5LO95447 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.17■□□□□ 0.82
LCA5LO95447 AC069152.1-201ENST00000438030 544 ntBASIC20.17■□□□□ 0.82
LCA5LO95447 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.17■□□□□ 0.82
LCA5LO95447 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.17■□□□□ 0.82
LCA5LO95447 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LCA5LO95447 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.17■□□□□ 0.82
LCA5LO95447 AC133041.1-202ENST00000642053 222 ntBASIC20.17■□□□□ 0.82
LCA5LO95447 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCA5LO95447 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCA5LO95447 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCA5LO95447 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCA5LO95447 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.17■□□□□ 0.82
LCA5LO95447 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCA5LO95447 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCA5LO95447 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCA5LO95447 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LCA5LO95447 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LCA5LO95447 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.16■□□□□ 0.82
LCA5LO95447 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LCA5LO95447 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LCA5LO95447 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LCA5LO95447 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.16■□□□□ 0.82
LCA5LO95447 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LCA5LO95447 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LCA5LO95447 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
LCA5LO95447 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
LCA5LO95447 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LCA5LO95447 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.16■□□□□ 0.82
LCA5LO95447 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
LCA5LO95447 Z85996.1-201ENST00000494644 937 ntBASIC20.16■□□□□ 0.82
LCA5LO95447 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.16■□□□□ 0.82
LCA5LO95447 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
LCA5LO95447 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LCA5LO95447 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LCA5LO95447 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.16■□□□□ 0.82
LCA5LO95447 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LCA5LO95447 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.16■□□□□ 0.82
LCA5LO95447 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LCA5LO95447 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.16■□□□□ 0.82
LCA5LO95447 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LCA5LO95447 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LCA5LO95447 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
LCA5LO95447 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCA5LO95447 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCA5LO95447 PRKY-204ENST00000533551 1019 ntBASIC20.15■□□□□ 0.82
LCA5LO95447 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.15■□□□□ 0.82
LCA5LO95447 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCA5LO95447 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCA5LO95447 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCA5LO95447 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
LCA5LO95447 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.15■□□□□ 0.82
LCA5LO95447 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LCA5LO95447 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LCA5LO95447 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCA5LO95447 AL499627.1-201ENST00000569373 2188 ntBASIC20.15■□□□□ 0.82
LCA5LO95447 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
LCA5LO95447 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.15■□□□□ 0.82
LCA5LO95447 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LCA5LO95447 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
LCA5LO95447 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
LCA5LO95447 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
LCA5LO95447 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.14■□□□□ 0.82
LCA5LO95447 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LCA5LO95447 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LCA5LO95447 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LCA5LO95447 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.14■□□□□ 0.81
LCA5LO95447 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms