Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.07■□□□□ 0.64
VAPBO95292 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VAPBO95292 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VAPBO95292 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.06■□□□□ 0.64
VAPBO95292 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VAPBO95292 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.06■□□□□ 0.64
VAPBO95292 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.06■□□□□ 0.64
VAPBO95292 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VAPBO95292 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VAPBO95292 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
VAPBO95292 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VAPBO95292 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VAPBO95292 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VAPBO95292 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VAPBO95292 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.06■□□□□ 0.64
VAPBO95292 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.06■□□□□ 0.64
VAPBO95292 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.06■□□□□ 0.64
VAPBO95292 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VAPBO95292 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
VAPBO95292 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
VAPBO95292 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
VAPBO95292 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.06■□□□□ 0.64
VAPBO95292 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VAPBO95292 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
VAPBO95292 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
VAPBO95292 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VAPBO95292 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VAPBO95292 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
VAPBO95292 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.05■□□□□ 0.64
VAPBO95292 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
VAPBO95292 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VAPBO95292 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
VAPBO95292 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VAPBO95292 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.05■□□□□ 0.64
VAPBO95292 AC004980.1-204ENST00000429707 299 ntBASIC19.05■□□□□ 0.64
VAPBO95292 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.05■□□□□ 0.64
VAPBO95292 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
VAPBO95292 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.05■□□□□ 0.64
VAPBO95292 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
VAPBO95292 AL353708.3-201ENST00000610272 989 ntBASIC19.05■□□□□ 0.64
VAPBO95292 AL031598.1-201ENST00000561511 1773 ntBASIC19.05■□□□□ 0.64
VAPBO95292 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.05■□□□□ 0.64
VAPBO95292 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
VAPBO95292 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VAPBO95292 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VAPBO95292 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
VAPBO95292 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
VAPBO95292 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.04■□□□□ 0.64
VAPBO95292 AL512353.2-201ENST00000448759 1962 ntBASIC19.04■□□□□ 0.64
VAPBO95292 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
VAPBO95292 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.04■□□□□ 0.64
VAPBO95292 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VAPBO95292 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VAPBO95292 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
VAPBO95292 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.04■□□□□ 0.64
VAPBO95292 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VAPBO95292 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VAPBO95292 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VAPBO95292 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VAPBO95292 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
VAPBO95292 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
VAPBO95292 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VAPBO95292 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
VAPBO95292 KSR1P1-201ENST00000446298 240 ntBASIC19.04■□□□□ 0.64
VAPBO95292 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.04■□□□□ 0.64
VAPBO95292 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
VAPBO95292 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.04■□□□□ 0.64
VAPBO95292 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.04■□□□□ 0.64
VAPBO95292 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.04■□□□□ 0.64
VAPBO95292 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
VAPBO95292 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.04■□□□□ 0.64
VAPBO95292 ITM2C-210ENST00000620962 501 ntBASIC19.04■□□□□ 0.64
VAPBO95292 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.04■□□□□ 0.64
VAPBO95292 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
VAPBO95292 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VAPBO95292 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.04■□□□□ 0.64
VAPBO95292 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.04■□□□□ 0.64
VAPBO95292 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VAPBO95292 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VAPBO95292 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
VAPBO95292 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
VAPBO95292 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.04■□□□□ 0.64
VAPBO95292 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VAPBO95292 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
VAPBO95292 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VAPBO95292 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VAPBO95292 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VAPBO95292 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VAPBO95292 AC093525.10-201ENST00000625130 1569 ntBASIC19.03■□□□□ 0.64
VAPBO95292 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VAPBO95292 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VAPBO95292 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
VAPBO95292 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VAPBO95292 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VAPBO95292 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
VAPBO95292 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
VAPBO95292 KRT18P29-201ENST00000397031 1267 ntBASIC19.03■□□□□ 0.64
VAPBO95292 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
VAPBO95292 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.03■□□□□ 0.64
VAPBO95292 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms