Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.01■□□□□ 0.63
GPC4O75487 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.01■□□□□ 0.63
GPC4O75487 AL353708.3-201ENST00000610272 989 ntBASIC19.01■□□□□ 0.63
GPC4O75487 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GPC4O75487 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GPC4O75487 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
GPC4O75487 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GPC4O75487 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GPC4O75487 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GPC4O75487 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
GPC4O75487 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
GPC4O75487 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
GPC4O75487 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
GPC4O75487 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GPC4O75487 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GPC4O75487 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
GPC4O75487 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19■□□□□ 0.63
GPC4O75487 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19■□□□□ 0.63
GPC4O75487 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
GPC4O75487 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19■□□□□ 0.63
GPC4O75487 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
GPC4O75487 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GPC4O75487 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
GPC4O75487 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
GPC4O75487 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GPC4O75487 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GPC4O75487 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
GPC4O75487 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC19■□□□□ 0.63
GPC4O75487 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
GPC4O75487 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GPC4O75487 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19■□□□□ 0.63
GPC4O75487 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19■□□□□ 0.63
GPC4O75487 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19■□□□□ 0.63
GPC4O75487 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19■□□□□ 0.63
GPC4O75487 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19■□□□□ 0.63
GPC4O75487 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19■□□□□ 0.63
GPC4O75487 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19■□□□□ 0.63
GPC4O75487 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GPC4O75487 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
GPC4O75487 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GPC4O75487 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GPC4O75487 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19■□□□□ 0.63
GPC4O75487 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GPC4O75487 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
GPC4O75487 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
GPC4O75487 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
GPC4O75487 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19■□□□□ 0.63
GPC4O75487 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19■□□□□ 0.63
GPC4O75487 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19■□□□□ 0.63
GPC4O75487 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
GPC4O75487 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.99■□□□□ 0.63
GPC4O75487 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
GPC4O75487 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
GPC4O75487 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
GPC4O75487 OR6D1P-202ENST00000641007 5290 ntBASIC18.99■□□□□ 0.63
GPC4O75487 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
GPC4O75487 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GPC4O75487 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
GPC4O75487 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GPC4O75487 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GPC4O75487 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.99■□□□□ 0.63
GPC4O75487 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.99■□□□□ 0.63
GPC4O75487 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
GPC4O75487 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GPC4O75487 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
GPC4O75487 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
GPC4O75487 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
GPC4O75487 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.99■□□□□ 0.63
GPC4O75487 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.99■□□□□ 0.63
GPC4O75487 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.99■□□□□ 0.63
GPC4O75487 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
GPC4O75487 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.99■□□□□ 0.63
GPC4O75487 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
GPC4O75487 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
GPC4O75487 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.98■□□□□ 0.63
GPC4O75487 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.98■□□□□ 0.63
GPC4O75487 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GPC4O75487 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GPC4O75487 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GPC4O75487 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GPC4O75487 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GPC4O75487 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GPC4O75487 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GPC4O75487 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
GPC4O75487 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.98■□□□□ 0.63
GPC4O75487 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
GPC4O75487 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
GPC4O75487 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
GPC4O75487 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
GPC4O75487 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.98■□□□□ 0.63
GPC4O75487 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GPC4O75487 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
GPC4O75487 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.98■□□□□ 0.63
GPC4O75487 NIFKP9-201ENST00000419265 221 ntBASIC18.98■□□□□ 0.63
GPC4O75487 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
GPC4O75487 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
GPC4O75487 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
GPC4O75487 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.98■□□□□ 0.63
GPC4O75487 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
GPC4O75487 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms